Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3006 ATGGCTTCCAGTGGAGTTGCTCTGTTCTTCACTTGCTTTCTTGTTCTTCTGGTTTCCTTCATCCATGCCTCTTCTTTTCACTGCGAATCTGAATCTTCTTCTTCATCCTCCTGTACCAACCCCAATAAACATCCTCTAGTGAAGGGACTCTCATGGAGTTTCTACGAATCAACCTGTCCTAACCTTAATTACCTCATCAGAAAACACCTCAAGAAGGTCTTTATCGACGACATCGGCCTCGCCGCCGGCTTGCTTCGCCTTCATTTCCACGATTGCTTCGTCCAGGGATGTGACGGGTCGGTCTTACTGGACGGATCTGCAAGTGGGCCAAGCGAGAAGGATGCACCACCAAACCTGAGCTTGAGGGCTGAGGCTTTCAAGATCATCGAAGACCTCAGAGCTCTCGTGCACCATCACTGTGGAAGCGTCGTCTCTTGCTCCGACATCGTCGCCGTCGCCGCCCGCGACTCCGTTTTCTTGTCTGGAGGACCAGAGTATAAAGTTCCCTTGGGAAGACGAGATGGCCTGACGTTTGCCACAAGAAACGCCACGTTGGCGAACCTCCCTGCGCCGACGAGCAATGCCACCGTGATCCTCGATTCACTGGCCACTAAAGGATTCAACCCGGTCGATGTTGTTGCCCTCTCCGGCGGCCACACCATCGGCATAAGCCACTGTACTTCCTTCACAAACAGGCTTTACCCTAACCAAGACCCCGTTATGGACAAGTCCTTGGCCGGCAAGCTCAAGCTCACGTGCCCCGCCGCAAACACCGACAACACCACCGTGATGGACCTCCGGACACCCGACTTGTTTGACAACAAGTACTATGTCGGCCTCGTGAAGCGTGAGGGACTCTTTACCTCCGACCAAGATTTGTTCACCGATGAGAGGACGAAGGAGATTGTGATAGAATTTGCTGAGGACCAGAGTGTTTTCTTTGAGAAATTTGCGGAAGCTATGGTGAAGATGGGTCAACTGGGCGTGTTGACCGGTAATAATGGAGAGATAAGAGGGAATTGTTCTGTGAGGAACCAAGATTATGAAACTTTCTTAAAGAGGTACGCGGTGGAGGATGTTGAGGAAGACAGGTCGGAGCTGTGA 1104 0.5181 MASSGVALFFTCFLVLLVSFIHASSFHCESESSSSSSCTNPNKHPLVKGLSWSFYESTCPNLNYLIRKHLKKVFIDDIGLAAGLLRLHFHDCFVQGCDGSVLLDGSASGPSEKDAPPNLSLRAEAFKIIEDLRALVHHHCGSVVSCSDIVAVAARDSVFLSGGPEYKVPLGRRDGLTFATRNATLANLPAPTSNATVILDSLATKGFNPVDVVALSGGHTIGISHCTSFTNRLYPNQDPVMDKSLAGKLKLTCPAANTDNTTVMDLRTPDLFDNKYYVGLVKREGLFTSDQDLFTDERTKEIVIEFAEDQSVFFEKFAEAMVKMGQLGVLTGNNGEIRGNCSVRNQDYETFLKRYAVEDVEEDRSEL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3006 367 CDD secretory_peroxidase 49 343 IPR033905 GO:0004601|GO:0042744
Alju01g3006 367 Gene3D Peroxidase, domain 2 190 325 - -
Alju01g3006 367 SUPERFAMILY Heme-dependent peroxidases 44 347 IPR010255 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 PRINTS Haem peroxidase superfamily signature 211 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 PRINTS Haem peroxidase superfamily signature 81 95 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 PRINTS Haem peroxidase superfamily signature 162 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 PRINTS Haem peroxidase superfamily signature 144 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 ProSitePatterns Peroxidases active site signature. 81 92 IPR019794 GO:0004601
Alju01g3006 367 ProSitePatterns Peroxidases proximal heme-ligand signature. 211 221 IPR019793 -
Alju01g3006 367 FunFam Peroxidase 53 201 - -
Alju01g3006 367 FunFam Peroxidase 189 324 - -
Alju01g3006 367 PANTHER - 24 345 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 Gene3D - 54 342 - -
Alju01g3006 367 Pfam Peroxidase 67 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 ProSiteProfiles Plant heme peroxidase family profile. 49 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 PRINTS Plant peroxidase signature 279 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 PRINTS Plant peroxidase signature 59 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 PRINTS Plant peroxidase signature 319 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 PRINTS Plant peroxidase signature 83 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 PRINTS Plant peroxidase signature 162 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 PRINTS Plant peroxidase signature 210 222 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 PRINTS Plant peroxidase signature 263 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 PRINTS Plant peroxidase signature 124 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Alju01g3006 367 PRINTS Plant peroxidase signature 143 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3006 Alju-ChrAlju01 50254059 50256001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3006 45 362 Peroxidase AT1G71695 62.382 7.15e-150 425