Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2992 ATGGGAAATGCAGCTTCTTCGTTCTGGTTCACCACTTCGCCGCAGAAGCATCCTCAGGAGAGGAGAAGGATGTCGCACAGGAAGTTCGAGCACCCCAGGCATGGTTCTCTGGGATTTCTCCCTAGGAAGCGTGCTGCGCGTCACAGGGGAAAAGTGAAGGCGTTCCCCAAGGATGACCCAAGCAAGGCACCCAGGCTTACTGCCTTCTTGGGTTACAAGGCAGGCATGACTCACATTGTAAGAGAGGTCGAGAAACCAGGGTCAAAACTTCACAAGAAGGAAACCTGTGAGCCTGTTACAATTATTGAGACTCCTCCAATGGTTATTGTTGGGGTTGTGGGTTATGTGAAAACACCCCGTGGCCTTCGCACATTGGGCACTGTATGGGCTCAGCATTTGAGTGAGGATGTGAAGCGCAGGTTCTATAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCACAAAGTACTCCAAGCAGTATGAATCTGAAGAAGGGAAGAAAAGCATTCAGGCCCAGCTTGAGAAAATCAAGAAGTATGCATCAGTTGTTCGTGTTTTGGCTCACACCCAGATTAGAAAGATGAAAGGTTTGAAGCAGAAGAAAGCACACCTCATGGAGATTCAGGTCAATGGTGGTACAATTGCACAGAAGGTGGACTATGCATACAATTTCTTTGAGAAGCAGGTTCCTGTTGATGCTGTATTCCAGAAGGATGAGATGATCGATCTCATCGGTGTTACAAAGGGTAAAGGTTATGAAGGTGTTGTCACTCGTTGGGGTGTTACCCGCCTTCCCCGCAAGACTCACAGGGGTCTGAGGAAAGTTGCCTGTATTGGTGCCTGGCATCCTGCCAGAGTTTCTTTCACAGTTGCCAGAGCTGGTCAGAATGGATACCACCACCGCACAGAGTTGAACAAGAAGGTTTACAAGCTTGGCAAAGCTGGGGATGAATCGCATGCCGCTATTACTGACTTTGACAGGACTGAGAAGGACATAACCCCATTGGGTGGCTTCCCTCACTATGGTATTGTGAAGGATGACTATGTGATGATCAAGGGATGCTGTGTTGGTCCCAAGAAAAGAGTTATCACATTGCGCCAATCCCTCCTTAAGCAGACCTCTCGTGTTGCTCTGGAGGAGATCAAGCTCAAGTTTATCGACACATCTTCCAAGTTTGGCCATGGCCGCTTCCAGACAACACAGGAGAAGCAAAAGTTCTTTGGACGTCTCAAGGCTTAA 1239 0.4843 MGNAASSFWFTTSPQKHPQERRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPRLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEDVKRRFYKNWCKSKKKAFTKYSKQYESEEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYNFFEKQVPVDAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHAAITDFDRTEKDITPLGGFPHYGIVKDDYVMIKGCCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2992 412 Gene3D Ribosomal protein L3, domain 3 24 297 IPR044892 -
Alju01g2992 412 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 24 407 IPR045077 GO:0003735|GO:0005840|GO:0006412
Alju01g2992 412 SUPERFAMILY Translation proteins 27 393 IPR009000 -
Alju01g2992 412 MobiDBLite consensus disorder prediction 1 15 - -
Alju01g2992 412 FunFam 60S ribosomal protein L3 24 97 - -
Alju01g2992 412 FunFam Ribosomal protein L3 288 412 - -
Alju01g2992 412 FunFam 60S ribosomal protein L3 67 190 - -
Alju01g2992 412 ProSitePatterns Ribosomal protein L3 signature. 235 258 IPR019926 -
Alju01g2992 412 Pfam Ribosomal protein L3 24 393 IPR000597 GO:0003735|GO:0005840|GO:0006412
Alju01g2992 412 MobiDBLite consensus disorder prediction 1 38 - -
Alju01g2992 412 FunFam 60S ribosomal protein L3 249 297 - -
Alju01g2992 412 Gene3D - 106 230 - -
Alju01g2992 412 Gene3D Translation factors 67 408 - -
Alju01g2992 412 FunFam 60S ribosomal protein L3 106 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2992 Alju-ChrAlju01 49216613 49219381 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2992 24 410 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 85.013 0.0 690