Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2991 ATGTTCAGATTCCTAATAGGTTTGGCTGTAGGGAAGCTATGTCAAGAGAGTCAAGCGGAAGAATCAACTTCAATCAGTGCATCTTCTTCGCTCTGGTTCACCACTTCGCCGCAAAAGCAACCTGAGGAGAGGAGAAGGATGTCGCACAGGAAGTTCGAGCACCCCAGGCATGGTTCTCTGGGATTTCTCCCTAGGAAGCGTGCTGCGCGTCACAGGGGAAAAGTGAAGGCGTTCCCCAAGGATGACCCAAGCAAGGCACCCAGGCTTACTGCCTTCTTGGGTTACAAGGCAGGCATGACTCACATTGTAAGAGAGGTCGAGAAACCAGGGTCAAAACTTCACAAGAAGGAAACCTGTGAGCCTGTTACAATTATTGAGACTCCTCCAATGGTTATTGTTGGGGTTGTGGGTTATGTGAAAACACCCCGTGGCCTTCGCACATTGGGCACTGTATGGGCTCAGCATTTGAGTGAGGATGTGAAGCGCAGGTTCTATAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCACAAAGTACTCCAAGCAGTATGAATCTGAAGAAGGGAAGAAAAGCATTCAGGCCCAGCTTGAGAAAATCAAGAAGTATGCATCAGTTGTTCGTGTTTTGGCTCACACCCAGATTAGAAAGATGAAAGGTTTGAAGCAGAAGAAAGCACACCTCATGGAGATTCAGGTCAATGGTGGTACAATTGCACAGAAGGTGGACTATGCATACAATTTCTTTGAGAAGCAGGTTCCTGTTGATGCTGTATTCCAGAAGGATGAGATGATCGATCTCATCGGTGTTACAAAGGGTAAAGGTTATGAAGGTGTTGTCACTCGTTGGGGTGTTACCCGCCTTCCCCGCAAGACTCACAGGGGTCTGAGGAAAGTTGCCTGTATTGGTGCCTGGCATCCTGCCAGAGTTTCTTTCACAGTTGCCAGAGCTGGTCAGAATGGATACCACCACCGCACAGAGTTGAACAAGAAGGTTTACAAGCTTGGCAAAGCTGGGGATGAATCGCATGCCGCTATTACTGACTTTGACAGGACTGAGAAGGACATAACCCCATTGGGTGGCTTCCCTCACTATGGTATTGTGAAGGATGACTATGTGATGATCAAGGGATGCTGTGTTGGTCCCAAGAAAAGAGTTATCACATTGCGCCAATCCCTCCTTAAGCAGACCTCTCGTGTTGCTCTGGAGGAGATCAAGCTCAAGTTTATCGACACATCTTCCAAGTTTGGCCATGGCCGCTTCCAGACAACACAGGAGAAGCAAAAGTTCTTTGGACGTCTCAAGGCTTAA 1308 0.4801 MFRFLIGLAVGKLCQESQAEESTSISASSSLWFTTSPQKQPEERRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPRLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEDVKRRFYKNWCKSKKKAFTKYSKQYESEEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYNFFEKQVPVDAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHAAITDFDRTEKDITPLGGFPHYGIVKDDYVMIKGCCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2991 435 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 47 430 IPR045077 GO:0003735|GO:0005840|GO:0006412
Alju01g2991 435 Gene3D Translation factors 90 431 - -
Alju01g2991 435 FunFam 60S ribosomal protein L3 47 120 - -
Alju01g2991 435 Gene3D Ribosomal protein L3, domain 3 47 320 IPR044892 -
Alju01g2991 435 SUPERFAMILY Translation proteins 50 416 IPR009000 -
Alju01g2991 435 ProSitePatterns Ribosomal protein L3 signature. 258 281 IPR019926 -
Alju01g2991 435 Pfam Ribosomal protein L3 47 416 IPR000597 GO:0003735|GO:0005840|GO:0006412
Alju01g2991 435 MobiDBLite consensus disorder prediction 39 60 - -
Alju01g2991 435 FunFam 60S ribosomal protein L3 129 253 - -
Alju01g2991 435 FunFam Ribosomal protein L3 311 435 - -
Alju01g2991 435 Gene3D - 129 253 - -
Alju01g2991 435 MobiDBLite consensus disorder prediction 27 60 - -
Alju01g2991 435 FunFam 60S ribosomal protein L3 272 320 - -
Alju01g2991 435 FunFam 60S ribosomal protein L3 90 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2991 Alju-ChrAlju01 49176391 49181183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2991 47 433 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 85.013 0.0 692