Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2966 ATGGTTACTGTTTTTGATCCCATTCGTTCATTGACCCCTAAGCGCCGTAATTGGCGTATTTGTGTCCGACTTGTCAGGAAGTGGAATATGCCCGCTAGGCACAGTCACGGTGATGCATTCTCCATGGAGCTAGTGATGCAGGATATTCATGGTGATCGTGTCCATGCATCTGTGCGAAGTGGATTTGTTCATCGCCATAAGAAACATCTGGAAGAGGGCGCAGTTGTGGAGCTCTCCAATTTTGTCATGGTTCCTGCCACTGGGTCGTACCGGCCAACTGAACACCCGTATCGTGTTAACTTCCAGTTTTCTACTGTTGTCCAACCTCACAAGGATGATCATAGCATCTCACGCTATGGCTTTGCTTTCAAGAATTTCTCTGACATACTCTCTTCAGACTTGGATGATCGTTTTCTGTTTGACATTGTTGGGAGGGTGTCTGCTATGGGCCAACTAGAAGAGTGCACAGTGCAAGGACGACGTCAGCATCGAGTCGATATAGAATTAGCGAATGAAGACCTAGAACATCTCCAATGTACCCTTTGGGGGGAATTTGCAGATAACCTACTATCATATATGGCCTCTCACAAGTCTGGCCCCGTCGTGATCATACTCCAGTGGTGCAAGGCGCGAGAATTTAACCGAGTTGATGTCTCACAGCCACCAGACCGTATTACACCTCAGGGTACTTTAACTCTCGCGGAAGAGTTGCTGGGAAACCCAGACAGACGACAGATCCAAGGAATACGTAAAGGGCCAGCGTTTGAAGCTATGGACGAGACTGGGACTTGCATCTTTGTGTTATTTGATAGGGAGTTCTCTAAGTTGGCCGGCTGTTCTGCAGTAGAGATGATAGATCGAGTAATTCATCAGCCTATTCACCATGATGATGATGTTGAAAATGACAATGTTCTCCCTACGGATGTTGTGGACAAGATTGTAGGCAAAAAATTTCTGTGCATGTTAAGAATTCCTAAGGAATATGTGGATGGTTCTTCCAGTTCATGCATTGTGACGCGCTTGACTTCGGACTCTGAAATTATTGAAGCGTTTGAGGCTGAACAAGATGCTCCAACTGGCTCCCCTACAATGGTGTCTTCCAGCCATGAAGATGACCCTGATGTCAACATGTCCCTTCTTGACTTTGACAGTGCAAGCTCATCGGTGATTGCGGGTGAAAAAGTAGATGTCAAAGTAAAAATTGAAAAGGCTGATTCTGCTCATGATGATGATGAATGCTTAGCTAATTATTTGGTTAGCACTTCAGACAAGCCAAAACGTGAAGATAAAGTTGTTAAAGTGTCCAAGACAAAGAAGAAGCATAAGTTTGTCATTGATGATTAG 1344 0.4501 MVTVFDPIRSLTPKRRNWRICVRLVRKWNMPARHSHGDAFSMELVMQDIHGDRVHASVRSGFVHRHKKHLEEGAVVELSNFVMVPATGSYRPTEHPYRVNFQFSTVVQPHKDDHSISRYGFAFKNFSDILSSDLDDRFLFDIVGRVSAMGQLEECTVQGRRQHRVDIELANEDLEHLQCTLWGEFADNLLSYMASHKSGPVVIILQWCKAREFNRVDVSQPPDRITPQGTLTLAEELLGNPDRRQIQGIRKGPAFEAMDETGTCIFVLFDREFSKLAGCSAVEMIDRVIHQPIHHDDDVENDNVLPTDVVDKIVGKKFLCMLRIPKEYVDGSSSSCIVTRLTSDSEIIEAFEAEQDAPTGSPTMVSSSHEDDPDVNMSLLDFDSASSSVIAGEKVDVKVKIEKADSAHDDDECLANYLVSTSDKPKREDKVVKVSKTKKKHKFVIDD 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2966 447 MobiDBLite consensus disorder prediction 353 372 - -
Alju01g2966 447 SUPERFAMILY Nucleic acid-binding proteins 5 114 IPR012340 -
Alju01g2966 447 CDD RPA1_DBD_A_like 19 107 - -
Alju01g2966 447 Gene3D - 115 251 IPR012340 -
Alju01g2966 447 SUPERFAMILY Nucleic acid-binding proteins 121 220 IPR012340 -
Alju01g2966 447 Gene3D - 254 350 IPR012340 -
Alju01g2966 447 Gene3D - 4 109 IPR012340 -
Alju01g2966 447 Pfam Domain of unknown function DUF223 43 134 IPR003871 -
Alju01g2966 447 CDD RPA1_DBD_B_like 141 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2966 Alju-ChrAlju01 48182944 48185457 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2966 5 219 Core DNA Replication Machinery Family AT5G45400 25.000 8.71e-12 65.5