Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2962 ATGAATAGAAGAAGTTTGCAGTACTTATCGGAACTGAAAATTACTTGCAAATTTGTAAACCAAAGTTTGAAAGTGATAATATCTAGCTGGAGGAAGAAGATGGAGGATTTTTGGAGAATATTTTGTGAAGAATCGAGTTGTTCAAAACGAGGGGGGAAACATTGCAGTTATGATTTTGAGCTTCTGAAAGATCCTTCGACGTGCATGAACCATTTGATGATTATCTGCCTCAATGTGTTACTGCTGATGTTGCTTCTATTCACAGTAATACTCAAGTCATCAACAAAGACTTTTCATGTCTCTAGCCAAGTACGAAGGTTCTCAAATTTGCAAGTGGCTTCTGCAATAGTGAGTGGCTTCCTTGGCTTGGTTCATTTGTGCCTAGGCATTTGGATTTTAGAGGAGAAATTGAGGAAAACTCACACTGTTTTTCCTCTCCATTGGTGGATTCTAGAGGTTTCTCAAGGGATCGCATGGTTGTATGTGGGTTTGACAATAAGTCTTAAGCTGAGAGAACTTCCAAAACCATGGTCAAGAATAGTATCTATTTTCGTCTTCTTAATTACTGGCATTTTTTGTTTTATTTCCATTTTTTTTGTCATTGGTGGAAGAGAAGTGTCCCTTAAGATAGCTTTAGATGCTTTATCCTTTCCTGGAGCAATTTTGTTGCTCATATGCTCATATAAGGGACGTACATATGATGAGAGAAATATCAATGAAAGCCTTTATGCTCCTTTAAATGGCGAGTCCACTGACATTGATAAAAGTAGTTCTGCTAATTATGTAACCCCATTTGCAAAAGCAGGATTCTTTAGCAAAATGTCATTTTGGTGGTTGAATCCATTGATGAAAATGGGAAAGGAGAAAGCTATCCAAGAAGAAGATATCCCGCAATTGCGAGAGGAAGATCAAGCTGAAAGCTGTTATTTGCTGTTTCTTGATCAAATGAACAGACAAAAACAGAAAGAACCATCATCACAACCATCTGTTTTCTGGACAATAATTATGTGCCATTGGAAAGATATCTTCATATCTGGATTTTTTGCATTGCTTAAGGTACTCACTATATCAGCTGGTCCACTGCTTCTAAATTCCTTTATATTGGTTGCTGAGGGCAAACAAAGTTTCAAATATGAAGGTTACATATTGGCCATAACACTTTTCTTCACAAAGATCTTCGAATCTTTATCACAAAGACAGTGGTACTTCCGAAGCAGACTCATCGGTTTACAAGTCAGATCACTGCTTACTGCAGCTATTTATAAAAAGCAATTGAGGCTATCTAATGCTTCAAGGCTGGTGCATTCAGGTGGGGAGATTATGAATTATGTAACTGTAGATGCGTATAGAATTGGAGAATTTCCCTTTTGGTTTCACCAGACTTGGACAACAAGTGTTCAATTATGTATTGCACTAGTAATTCTTTTTAATGCTGTGGGGCTAGCAACCATTGCTTCCTTGGTGGTCATAGTTCTCACTGTTCTTTGCAATACTCCTATAGCAAAGCTACAACATAGGTTTCAGACCAAACTTATGGTGGCACAAGATGAAAGATTGAAGGCTAGTTCTGAGGCTCTTGTGAATATGAAAGTGCTGAAGCTATATGCATGGGAAACCCATTTTAAGAATGCTATTGAAAGCTTGAGGAAAGTTGAGCTCAAGTGTTTGACTTCTGTGCAGTTAAGAAAGGCATACAATGTCTTTCTATTTTGGTCTTCACCTGTTTTGGTCTCTGCCGCTACATTTGGGGCTTGTTACTTCCTGAAAGTTCCTTTACATGCAAATAATGTTTTCACTTTTGTTGCAACGTTACGCCTTGTTCAAGATCCGATTAGAACAATCCCTGACGTTATTGGGGTGGTCATTCAAGCTAAAGTAGCATTTGCTCGGATTGTGAAATTCCTCGAGGCGCCAGAATTGCAGATTGCAAATGTTAGAAAGAAGAGCTCAAATGGAAGTCTTAACGGTTATATTCACATCAATGCAGCTGACTTTCCATGGGAAGATAATGATTCAAAGCCTACTTTAAGAAACATAAATCTAGATGTTAAACCCGGGCAAAAGGTTGCTATTTGTGGAGAAGTCGGCTCTGGAAAATCAACCTTATTGGCTGCAATTCTTGGAGAAGTTCCCAAAACTCATGGAACTATTGAAGTCCATGGGAAGTTTGCTTATGTTTCTCAAACAGCATGGATTCAAACAGGCACAATAAGGGAAAATATATTGTTTGGCTCAGCCATGGATTCTCAAAGGTATCAAGAAACACTTGAAAGGTCATCATTAATGAAGGATCTTGAGTTGTTTCCCTATGGTGATCTCACAGAAATAGGGGAGAGAGGTGTGAACCTTAGCGGAGGCCAAAAACAGCGAATTCAGCTCGCTCGTGCTCTTTATCAGAATGCTGATATATATCTGTTGGATGATCCATTCAGTGCTGTCGATGCACATACAGCCACAAATTTGTTTAATGAGTATGTCATGGAAGCACTTAGAGAAAAGACAGTCATGCTTGTGACTCATCAAGTTGATTTCCTCCCAGCATTTGATTCTATTTTGCTCATGTGTGATGGGGAAATTGTAGAAGCTGCTTCTTATCAGTATCTTCTATCTTCAAGCCAAGACTTTCAAAACCTTGTTAATGCTCACAAGGAGACTGCTGGTTCTGAAGGGCTTCCTGATGTTACTTCTTCTCATACTCATGTGAATCCCACCAAGGAGATTAGCAAGTCATATTCAGAGAAGCAGATTAAGGATACAGAAGGTGATCAATTAATTAAGCAAGAAGAAAGAGAAATTGGAGACACAGGGCTAAAGCCTTACTTGCAATATCTGAATCAAAACAAGGGCTATTTATACTTTTGTGCTGCTTCACTTATGCACCTTTCATTTGTGATTGGTCAAGTGCTACAGAACACATGGATGGCTGCTAATGTTGACAATCCTCACATTAGCACGCTGAAATTGATTGTGGTGTACTTGTTGATTGGAGTTGTTTCAACCTCTCTCTTACTAGTTAGAAGTCTGTCAATGGTTGCTCTAGGCATTCAATCATCAAAGTCTTTGTTTTCACAACTACTGAACTCTCTTTTCCGCGCACCTATGTCATTTTATGACTCCACGCCTCTGGGAAGGATTCTTAGTAGGGTCTCATCTGATTTGAGCATTGTCGATCTAGATGTTCCATTCAGCCTTATGTTTGCTGTTGGAGCCACCATTAATTGTTATACAAATCTTGCTGTATTAGTGGTTGTTACTTGGCAAGTCTTGTTGGTATCTATACCAATGGTTTATATTGCAATTCGTCTGCAGAGATACTACTTTGCCTCTGCAAAAGAGTTGATGCGATTAAATGGCACAACAAAATCCTATGTAGCTAATCATCTAGCAGAATCTGTTGCTGGTGCTATGACAATAAGGGCTTTTGAGGAGGAAGATAGTTTCTTCGCCAAGAATCTTGATTTAATCGATGTCAATGCCTCACCTTTCTTCCATAACTTTACAGCAAATGAGTGGTTGATTCAACGTTTAGAAACAGTTAGCGCGTTTGTTCTTGTCTCCGCGGCACTTTGCATGGTAGTACTTCCACCTGGGACTTTCTCATCTGGGTTTATTGGCATGGCCATTTCTTATGGGCTTTCATTAAATGCTTCCCTTGTGTTCTCAATTCAAAACCAATGCACAATAGCAAACTACATAATATCAGTGGAGAGGTTGAATCAATACATGTATATTCCAAGTGAAACTCCAGAAGTCATAGAAGGAAATCAGCCTCCAGTAAATTGGCCTGTGGTTGGAAAAGTAGAAATAAATAATCTGCAGATCAGGTATAGGCCCGATTCACCTCTTGTACTCCGAGGAATCACTTGCAAATTTGAAGGAGGGCACAAGATTGGCATTGTTGGTAGGACAGGTAGTGGAAAGTCAACTCTCATTGGTGCGTTGTTTCGCCTCGTGGAACCAGCTGGTGGAAAGATCATTGTCGATGGCATAGACATTTGTACAATTGGCCTCCATGATTTGAGATCACGTTTTGGTGTCATACCACAGGATCCCACTCTTTTTAATGGCACAGTTAGATATAACATGGACCCCTTGTCTCAACACTCGGACCAAGAGATATGGGAGGTTCTTGGAAAGTGTCAATTGCGAGAGGCGGTTCAAGAGAAAGAAGGCGGCTTAGACTCTTCAGTTGTGGAAGCGGGATCTAACTGGAGCATGGGACAGAGGCAGCTATTCTGTTTGGGGCGAGCTCTTCTAAGGAGAAGTCGTATTTTGGTACTCGATGAAGCGACTGCATCAATCGATAATGCCACTGATTTGATTCTGCAGAAAACTTTAAGGAGTGAGTTTGCAGATTGTACTGTGGTCACAGTAGCTCACAGGATACCAACAGTGATGGACTGCACTAAAGTCCTATCCATAAGTGATGGAAAATTGGTGGAATATGATGAGCCAATGACGTTGATGAAGAGGGAAGATTCTTTGTTTGGGCAACTTGTGAAGGAATATTGGTCTCATCTGCAGTCTGCAGGATCATGTTGA 4542 0.3996 MNRRSLQYLSELKITCKFVNQSLKVIISSWRKKMEDFWRIFCEESSCSKRGGKHCSYDFELLKDPSTCMNHLMIICLNVLLLMLLLFTVILKSSTKTFHVSSQVRRFSNLQVASAIVSGFLGLVHLCLGIWILEEKLRKTHTVFPLHWWILEVSQGIAWLYVGLTISLKLRELPKPWSRIVSIFVFLITGIFCFISIFFVIGGREVSLKIALDALSFPGAILLLICSYKGRTYDERNINESLYAPLNGESTDIDKSSSANYVTPFAKAGFFSKMSFWWLNPLMKMGKEKAIQEEDIPQLREEDQAESCYLLFLDQMNRQKQKEPSSQPSVFWTIIMCHWKDIFISGFFALLKVLTISAGPLLLNSFILVAEGKQSFKYEGYILAITLFFTKIFESLSQRQWYFRSRLIGLQVRSLLTAAIYKKQLRLSNASRLVHSGGEIMNYVTVDAYRIGEFPFWFHQTWTTSVQLCIALVILFNAVGLATIASLVVIVLTVLCNTPIAKLQHRFQTKLMVAQDERLKASSEALVNMKVLKLYAWETHFKNAIESLRKVELKCLTSVQLRKAYNVFLFWSSPVLVSAATFGACYFLKVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFARIVKFLEAPELQIANVRKKSSNGSLNGYIHINAADFPWEDNDSKPTLRNINLDVKPGQKVAICGEVGSGKSTLLAAILGEVPKTHGTIEVHGKFAYVSQTAWIQTGTIRENILFGSAMDSQRYQETLERSSLMKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNEYVMEALREKTVMLVTHQVDFLPAFDSILLMCDGEIVEAASYQYLLSSSQDFQNLVNAHKETAGSEGLPDVTSSHTHVNPTKEISKSYSEKQIKDTEGDQLIKQEEREIGDTGLKPYLQYLNQNKGYLYFCAASLMHLSFVIGQVLQNTWMAANVDNPHISTLKLIVVYLLIGVVSTSLLLVRSLSMVALGIQSSKSLFSQLLNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFSLMFAVGATINCYTNLAVLVVVTWQVLLVSIPMVYIAIRLQRYYFASAKELMRLNGTTKSYVANHLAESVAGAMTIRAFEEEDSFFAKNLDLIDVNASPFFHNFTANEWLIQRLETVSAFVLVSAALCMVVLPPGTFSSGFIGMAISYGLSLNASLVFSIQNQCTIANYIISVERLNQYMYIPSETPEVIEGNQPPVNWPVVGKVEINNLQIRYRPDSPLVLRGITCKFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKIIVDGIDICTIGLHDLRSRFGVIPQDPTLFNGTVRYNMDPLSQHSDQEIWEVLGKCQLREAVQEKEGGLDSSVVEAGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTLRSEFADCTVVTVAHRIPTVMDCTKVLSISDGKLVEYDEPMTLMKREDSLFGQLVKEYWSHLQSAGSC 1513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2962 1513 MobiDBLite consensus disorder prediction 890 909 - -
Alju01g2962 1513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1256 1498 IPR027417 -
Alju01g2962 1513 CDD ABCC_MRP_domain2 1265 1485 - -
Alju01g2962 1513 MobiDBLite consensus disorder prediction 886 913 - -
Alju01g2962 1513 CDD ABCC_MRP_domain1 658 858 - -
Alju01g2962 1513 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 265 1501 - -
Alju01g2962 1513 SUPERFAMILY ABC transporter transmembrane region 331 636 IPR036640 GO:0005524|GO:0016020
Alju01g2962 1513 Pfam ABC transporter transmembrane region 958 1192 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g2962 1513 Pfam ABC transporter transmembrane region 342 608 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g2962 1513 ProSitePatterns ABC transporters family signature. 783 797 IPR017871 GO:0005524|GO:0016887
Alju01g2962 1513 SUPERFAMILY ABC transporter transmembrane region 950 1247 IPR036640 GO:0005524|GO:0016020
Alju01g2962 1513 Gene3D - 1251 1502 IPR027417 -
Alju01g2962 1513 FunFam ABC transporter C family member 5 916 1248 - -
Alju01g2962 1513 CDD ABC_6TM_ABCC_D2 953 1242 IPR044726 GO:0140359
Alju01g2962 1513 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 961 1230 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g2962 1513 SMART AAA_5 1293 1485 IPR003593 GO:0016887
Alju01g2962 1513 SMART AAA_5 685 858 IPR003593 GO:0016887
Alju01g2962 1513 Gene3D - 656 888 IPR027417 -
Alju01g2962 1513 CDD ABC_6TM_ABCC_D1 344 631 IPR044746 GO:0140359
Alju01g2962 1513 Pfam ABC transporter 1284 1432 IPR003439 GO:0005524
Alju01g2962 1513 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 343 623 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g2962 1513 Gene3D ABC transporter type 1, transmembrane domain 314 640 IPR036640 GO:0005524|GO:0016020
Alju01g2962 1513 Gene3D ABC transporter type 1, transmembrane domain 914 1248 IPR036640 GO:0005524|GO:0016020
Alju01g2962 1513 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 660 881 IPR003439 GO:0005524
Alju01g2962 1513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 654 881 IPR027417 -
Alju01g2962 1513 FunFam ABC transporter C family member 10 642 894 - -
Alju01g2962 1513 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1267 1501 IPR003439 GO:0005524
Alju01g2962 1513 FunFam ABC transporter C family member 10 326 639 - -
Alju01g2962 1513 FunFam ABC transporter C family member 3 1250 1502 - -
Alju01g2962 1513 Pfam ABC transporter 676 810 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2962 Alju-ChrAlju01 47573592 47584999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2962 654 874 Calmodulin-binding Proteins AT2G36910 30.380 2.31e-23 106