Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2959 ATGGAGCAGAAGCACGTTTTGTTGTCAGCATTGAGCTTAGGGGTCGGTGTGGGAGTGGGGCTTGGATTGAGTTCAGGGCAGATGCTTCAGAAATGGGTCGGAGGGAATCTAACGCTCTGCGGTGAGCAGATTGAGAAGGAGCTTTTCAGGCTCCTCATTGATGGCAACGAATGCAAGCAAACTCTTGAGCACTTTCCTTATTACTTAAGCGAAAGAACTTGTGAGTTATTGACAAGTGCTGCTTTTGTTCATTTAAAACAACTTCACTTCTCCAAACACACCCGTAACCTTTCGCCGGCAAGCAGGACAATTCTGCTTTCTGGACCTGCAGAACTTTACCTCCAAATACTTGCCAAGGCTTTAGCGCATCACTTTGAGTCAAAGTTGCTGCTGCTTGACATCGTCGACTTCTCTTTCAAGATGCAAAGCAAATATGGATGTGGAAGAAAAGAATCTTCTTTTCAAAGGTCCTTATCTGAGGCGACTCTCAAGCGAGTGTCCTGCTTTTTTGGTTCCTTTTCAGTTCTCCCTTCAACTGGGAAAACCAAAGGCACTTTGCGCACACATGGTAATAGTACTGGAAGTTCCAATACATCTTCAGAACTTAGTAGGAATTCCTCTGCTGCATCTGATATGAGTAGCACTGCCTCCCAATGTGGTCAAACAAATTCAGGTCCCTTGAAGCATACTAGTAGCTTGTGTTTTGATGAAAAACTCTTTCTACAATTGCTGTACAAGGTCTTGGTTTCTGTCTCAGAAAAAAGTTCCATCATTTTATACATTAGGGATGCTGACAAGATTTTCCTCCAATCAGAACGGCTATATAATTTGTTTCATAAAATGATTGAGAAACTTTCAGGGCCAGTGTTGGTACTCGGTTCCCACATATTAGATTCAGAAGATGAATGCTCGGAAGTTGATGAAAGGCTCGCAACATTGTTTCCTTACAACATTGAGATTAAACCACCTGAAGATGAGATTAGTCTTGGAAACTGGAAGGCCCAACTGGAAGAGAACATGAAAATTATTCAGTTTCAAGATAACAAAAAACACATTGCTGAAGTACTTGCGGCAAATGATATTGAATGTGACGGCTTGAATTCAATCTGCTGTGCAGACACAATGGTACTAAGTAATTATATTGAAGAAATTGTGATATCTGCAATACGTTACCACTTGATGAACACCAAGGATCCCGAATACCGAAATGGGAAGCTAATAATATCATCTGAGAGTTTGTCCCATGGTCTGAATCTATTTCAAGAAGGAAAAAGTACTGCTGAGGATACCCTGAAGCTGGAGACTACTGGAAACAAAGAAGTTCCTCCTGACAATGAGTTTGAGAAGCGCATTAGACCAGGGGTCATCCCCGCAAATGAGATCGGAGTTACATTTGCAGATATTGGTGCATTAGATGAAATTAAAGAGTCACTCCAAGAGCTAGTCATGCTTCCCCTTCGAAGGCCAGACCTTTTCAGAGGTGGACTTCTTAAGCCTTGCAGAGGTATATTGCTCTTTGGACCTCCAGGTACCGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGCTTTGTCAATGTCTCAATGTCTACCATCACTTCAAAATGGTTTGGAGAAGATGAGAAAAATGTCCGAGCTCTCTTCACATTGGCAGCAAAGGTTGCCCCAACTATTATTTTTGTTGATGAGGTTGACAGCATGCTCGGGCAGCGCACAAGAGTTGGAGAACATGAGGCTATGAGGAAGATTAAAAATGAATTCATGACGCACTGGGATGGTCTATTGACAAAATCAGCGGAGCAAATTCTTGTCCTTGCTGCAACAAACAGGCCATTTGACCTTGATGAAGCAATCATACGGCGGTTTGAGCGAAGAATCATGGTCGGCCTTCCGTCTGTTGAGAACAGGGAAATGATCTTGAAGACTCTACTGGCTAAGGAAAAGACTGAAAATTTAGACTTGAAAGAGCTTGCTGTCATGACAGAAGGATACAGTGGAAGTGATCTTAAGAATTTGTGCACAACTGCTGCTTATCGACCTGTTAGGGAGTTCATAAAGCAGGAGAAATTGAAAAATATGAATAAAAAAGTGGCAGAAGAACGAAGCTCAGAGGATGCTTCAGATGCTAAGGAAGGTGTAGAAGAGCAAGTAATTACCTTGAGGGCTTTAAACATGGAAGACATGAGACAGGCTAAGAGTCTGGTTGCTGCAAGTTTTGCAGCTGAAGGATCAATAATGGCTGAGCTGAAGCTGTGGAATGAGCTATATGGAGAAGGAGGTTCAAGAAAGAAGCAGCAACTCACTTACTTCGTTTAG 2328 0.424 MEQKHVLLSALSLGVGVGVGLGLSSGQMLQKWVGGNLTLCGEQIEKELFRLLIDGNECKQTLEHFPYYLSERTCELLTSAAFVHLKQLHFSKHTRNLSPASRTILLSGPAELYLQILAKALAHHFESKLLLLDIVDFSFKMQSKYGCGRKESSFQRSLSEATLKRVSCFFGSFSVLPSTGKTKGTLRTHGNSTGSSNTSSELSRNSSAASDMSSTASQCGQTNSGPLKHTSSLCFDEKLFLQLLYKVLVSVSEKSSIILYIRDADKIFLQSERLYNLFHKMIEKLSGPVLVLGSHILDSEDECSEVDERLATLFPYNIEIKPPEDEISLGNWKAQLEENMKIIQFQDNKKHIAEVLAANDIECDGLNSICCADTMVLSNYIEEIVISAIRYHLMNTKDPEYRNGKLIISSESLSHGLNLFQEGKSTAEDTLKLETTGNKEVPPDNEFEKRIRPGVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFRGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFVNVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKSAEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREMILKTLLAKEKTENLDLKELAVMTEGYSGSDLKNLCTTAAYRPVREFIKQEKLKNMNKKVAEERSSEDASDAKEGVEEQVITLRALNMEDMRQAKSLVAASFAAEGSIMAELKLWNELYGEGGSRKKQQLTYFV 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2959 775 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 462 637 - -
Alju01g2959 775 Pfam AAA+ lid domain 655 697 IPR041569 -
Alju01g2959 775 Gene3D - 462 721 IPR027417 -
Alju01g2959 775 Pfam ATPase family associated with various cellular activities (AAA) 503 633 IPR003959 GO:0005524|GO:0016887
Alju01g2959 775 Gene3D - 635 715 - -
Alju01g2959 775 ProSitePatterns AAA-protein family signature. 606 625 IPR003960 GO:0005524|GO:0016887
Alju01g2959 775 SMART AAA_5 499 636 IPR003593 GO:0016887
Alju01g2959 775 MobiDBLite consensus disorder prediction 184 224 - -
Alju01g2959 775 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 43 774 - -
Alju01g2959 775 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 462 683 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2959 Alju-ChrAlju01 47364905 47371162 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2959 463 702 Calmodulin-binding Proteins AT3G56690 38.525 5.33e-43 166