Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2956 ATGAAACGAACAAGCCAAGAAAAACTGGAGCTTTTCTCTCTGTTTCATTCTTTCCCCTTCAAATTTCTGCATTTTTACACTAATGATTCTGCAATGCATTCCCTCTATCTGCGTTTCTTGTGGGTACATTTCTTTTTCTTCATCACCTTCAATTTCCCCTCACCTTCAATTTCTGTCCCTTACTTGCCCTCACAAAACGTAACCCTCTTTGGTGACGCAAATTTCAGAAATAACGCCATTAGTCTTACCCAAGAACTCAGTTGCCACCGCCACCATTTTTCATCTTCTCCTTCTTGTTCTGGGGTTGGAAGAGCTTTCTATGTGAACCCAGTTCGGTTTCTTGATTCTGAAACGAACTCTACGGCTTCTTTTTCTTGCCACTTCACTTTTTCCATTGTCTCGTCCCCTTCGTCTCATTCTGGTGATGGAATTGCCTTCATGATTATCTCTGACACCGACTTGGTCAGCTTCTCCTCTGGCTATATGGGTCTCCCATCTATATCTGTAAATGAGCAAGATTCTTATTTTGCCGTGGAATTTGACACCAATTTTGACCCTTCACTGGGTGACATAAATGGGAATCACATTGGTATTGATGTTGATACAATCTTATCTATCGCCTCAGTGGATGCTATTTCTGAGGGAATCGATCTGAAGAGTGGGAGAAAAATTACTGCTTGGATTGAGTACAGAGATGCCCAGAAAATGGTTCGTGTATGGGTGGGTCACTCTCCAATTCGACCTCCAGCGCCTATTTTGGTTGTTCAGATTGACCTTTCTGAGAATCTTAAGGAGTATATGCATGTGGGATTCTCTGCCTCCAACGTGATGGGCTCAGGTATTCATAGTATTGATCATTGGCAATTCAAAACTTTTGGGTTTATTAGTTCAGTGACTCCTATAGATATGGTAGAGGAAGGAGATTGTTTCTTTTGTTATCCAGAGAATTCTACCATAGCTACTCAACAGATTGATAGTACTCACTTTCTAAAAGAAAAGCTTGTGGAGATGGCTTTTGGGCTGGGAGGCATTGCTGCATTTATAGTCTCTGCATTTATAATCTGCTTATTCTTGATTAAGAGGAAAAAGGCAAGTGTGGAACATCCTCTGAGAGAAGACCAACATTGTGAATTCCAAACCACAAAACTCCCCTCAAGATTGTCACTCTATGAAATCAAATTGGCCACAAGGGGATTCAGTACAGACAGACTTGTTGGGGAAGGAACATCGGCAAAAGTCTATAAAGGTTCTCTTCCATATGGGGGAGATGTTGCTGTGAAAAGATTTGGGAAGGTTAATGGCTGTAACAGCATAGACTATTTGCACAATCCTTTCAATAATGAGTTTGCCACCATGGCAGGCTGCTTAAGGCACAAAAACTTGGTTCGGCTTCAAGGATGGTGCGTTGAAGAGTCTGAGTTACTTCTTGTCTATGAGTACCTACCTAATGGTAGCCTCAACAGAATCCTACACAAGAACTACAATTCTTCAGTGGTTCTTTCATGGAAGCAAAGGGTGAACATAATTCTGGGGGTTGCTTCTGCCCTCACCTATCTTCATGAAGAGTGTGAGAGACATATCATTCACAGAGATGTGAAGACCTGCAATATAATGCTTGATGCAGATTTCAACGCCAAGCTGGGTGATTTTGGCCTGGCAGAAGTCTATGAGCATAGTTGTTGTGACACAAGAGAAGCTACTTTACCTGCAGGAACAATGGGGTACCTTGCACCTGAATATGTATATTCTGGTGTTCCAACCGTGAAGACTGATGTGTACAGTTTCGGCGTAGTGGTGCTAGAAGTGGCTACGGGGAGGAAGCCAGTGGAAGATGATGGAACTGTGATTATAGATTACGTGTGGAAGATGTGGGAAAAGAGAAAGCTGGTTGAATCAGGAGATCCAAGGTTGATGGGGAAGTTTGATGTGCAAGAGATGGAGAGGATGCTCAGGGTGGGGCTTATATGTGTGCACCCAGATCATGAGAACAGGCCAAGAGTGAGAGATGCAGCTAGGATTCTCAAGGGTGAAGCACCACTTCCGTTGTTACCTTCATTTAAACCAAGGGTGAGACTTAGGCCTATTTTACCAAATGATACTGAGGAAATATTGGATGTTATGGGAGACAGATCCAGTACTGATGAGGCTGCCTATTTGACCCCAAGGAGCCGCTTTAACTAG 2181 0.4292 MKRTSQEKLELFSLFHSFPFKFLHFYTNDSAMHSLYLRFLWVHFFFFITFNFPSPSISVPYLPSQNVTLFGDANFRNNAISLTQELSCHRHHFSSSPSCSGVGRAFYVNPVRFLDSETNSTASFSCHFTFSIVSSPSSHSGDGIAFMIISDTDLVSFSSGYMGLPSISVNEQDSYFAVEFDTNFDPSLGDINGNHIGIDVDTILSIASVDAISEGIDLKSGRKITAWIEYRDAQKMVRVWVGHSPIRPPAPILVVQIDLSENLKEYMHVGFSASNVMGSGIHSIDHWQFKTFGFISSVTPIDMVEEGDCFFCYPENSTIATQQIDSTHFLKEKLVEMAFGLGGIAAFIVSAFIICLFLIKRKKASVEHPLREDQHCEFQTTKLPSRLSLYEIKLATRGFSTDRLVGEGTSAKVYKGSLPYGGDVAVKRFGKVNGCNSIDYLHNPFNNEFATMAGCLRHKNLVRLQGWCVEESELLLVYEYLPNGSLNRILHKNYNSSVVLSWKQRVNIILGVASALTYLHEECERHIIHRDVKTCNIMLDADFNAKLGDFGLAEVYEHSCCDTREATLPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVVLEVATGRKPVEDDGTVIIDYVWKMWEKRKLVESGDPRLMGKFDVQEMERMLRVGLICVHPDHENRPRVRDAARILKGEAPLPLLPSFKPRVRLRPILPNDTEEILDVMGDRSSTDEAAYLTPRSRFN 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2956 726 FunFam L-type lectin-domain containing receptor kinase VIII.1 481 692 - -
Alju01g2956 726 PANTHER - 84 681 - -
Alju01g2956 726 Pfam Protein kinase domain 400 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2956 726 CDD STKc_IRAK 405 676 - -
Alju01g2956 726 ProSitePatterns Protein kinases ATP-binding region signature. 405 427 IPR017441 GO:0005524
Alju01g2956 726 Gene3D Phosphorylase Kinase; domain 1 360 480 - -
Alju01g2956 726 SMART serkin_6 399 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2956 726 Gene3D Transferase(Phosphotransferase) domain 1 481 678 - -
Alju01g2956 726 ProSiteProfiles Protein kinase domain profile. 399 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2956 726 CDD lectin_legume_LecRK_Arcelin_ConA 64 293 IPR001220 GO:0030246
Alju01g2956 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Alju01g2956 726 SUPERFAMILY Protein kinase-like (PK-like) 378 674 IPR011009 -
Alju01g2956 726 Pfam Legume lectin domain 63 291 IPR001220 GO:0030246
Alju01g2956 726 SUPERFAMILY Concanavalin A-like lectins/glucanases 48 297 IPR013320 -
Alju01g2956 726 Gene3D - 48 297 - -
Alju01g2956 726 FunFam L-type lectin-domain containing receptor kinase S.6 362 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2956 Alju-ChrAlju01 46185166 46187346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2956 43 726 Receptor kinase-like Gene Family AT5G42120 53.551 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Alju01g2956 Pkinase 9.5e-42 CL0016