Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2952 ATGGATCCCTTCATGGTATCGTCAACCACCACTGCGCCAACGCCGGCGGTGGAAGTCGGACAGGGGTCCGGAACTCCCCAGCTTGGGTCCCACCACTGTAGTGTCCCCTCCGGCAGCAACTCCAGAGCTACCAGCTATGATGACCTGGCTCGGTTCGACCCCTTTGACATCGACTTTATCGATAGCCCTCCACTACTTCCTAACGCTCCGATTGACCCCACCATTTCCTTTTCGCCCGAGGAATTGGGCTACCTGAACCCTGGGCCAAGCATGCCAGAGGGGTCCCTTGGGGGACATATCCATAGCTGGTATATGGATTCCGATCTCCTGGACTACATTGCAGACAGCGAAGGCTTCGCCGGAGCCACCGAGGATCTGAGCGGGAACGATGCTCTTCCGGCGAACCCAATGGTGCATCAGGCGCAGGGCGTTTGCATGGATGGTTCAACCAATACTGTGTCGACTGAGACTGAGCAGCCTATGGCGAATGAAGCTGTGAAGAAAGCCATGCCCAATGAGAAGCTCGCTGAACTAGCTGTGCTAGATCCCAAGCGAGCTAAGAGGATTATTGCTAATAGGGAATCTGCTGCTCGTTCAAAGGAGAGGAAGATTCGTCACACAGTAGAGCTGGAGAAGAAGGTGGACATACTTCAGTCTGAGTCAGCTGAGATCTCTGTCAACGTTGAGAAAATTCAGAAGGAAAATTCAGACTTGAAAGCTGAGAAGAAGGATATCGTACGTGTTGTAGAGTCTATGGATGGAGAAGCAAAGTCCATGAAGATTCTTAACATGAATCCACTAATTCATCACTTTCCTACAGAATTGAACCGAACTTTAAGGGATAAGCTGAGGGTACTTAAGAAGGAATATAAACAAAAAGTTGCATATAAATGCCACAATCATGGAAGGATGGTCTCTCATTTTTCTTCCCACTTAGCAGTGTATCAGGTGAAGCTTCTTCGATCTTGGCAGGGTCAACATCAACTTAGCATGCCTCCGTCGTGCTCAGATCAGCCTGACGACTCGGAGTCGGATTCGAATGACTCGAGTTCTGGCTCAGAAAATTAG 1068 0.4991 MDPFMVSSTTTAPTPAVEVGQGSGTPQLGSHHCSVPSGSNSRATSYDDLARFDPFDIDFIDSPPLLPNAPIDPTISFSPEELGYLNPGPSMPEGSLGGHIHSWYMDSDLLDYIADSEGFAGATEDLSGNDALPANPMVHQAQGVCMDGSTNTVSTETEQPMANEAVKKAMPNEKLAELAVLDPKRAKRIIANRESAARSKERKIRHTVELEKKVDILQSESAEISVNVEKIQKENSDLKAEKKDIVRVVESMDGEAKSMKILNMNPLIHHFPTELNRTLRDKLRVLKKEYKQKVAYKCHNHGRMVSHFSSHLAVYQVKLLRSWQGQHQLSMPPSCSDQPDDSESDSNDSSSGSEN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2952 355 SMART brlzneu 180 244 IPR004827 GO:0003700|GO:0006355
Alju01g2952 355 MobiDBLite consensus disorder prediction 328 355 - -
Alju01g2952 355 SUPERFAMILY Leucine zipper domain 184 239 IPR046347 GO:0003700|GO:0006355
Alju01g2952 355 Gene3D - 183 246 - -
Alju01g2952 355 Pfam bZIP transcription factor 184 242 IPR004827 GO:0003700|GO:0006355
Alju01g2952 355 CDD bZIP_plant_RF2 185 235 IPR044759 GO:0003700|GO:0006355
Alju01g2952 355 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 245 IPR004827 GO:0003700|GO:0006355
Alju01g2952 355 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 90 351 - -
Alju01g2952 355 Coils Coil 214 248 - -
Alju01g2952 355 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2952 Alju-ChrAlju01 45761197 45775920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2952 30 287 bZIP Transcription Factor Family AT1G43700 33.333 1.04e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju01g2952 bZIP_1 4e-09 CL0018