Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2932 ATGGGAAGCACTGAAGGGATTGGAGGAGAGTGTTTGGAAGATGTTGGATTGAAAGAGACTGTATATGTTGCAGTGGGGAAGAATATAGAGAAGAGCCGTCAAGTTCTGCTCTGGGCAGTGCATAATTGTGCTGACAAGAAGATATGCGTGCTTCATGTTCATCGGCCTGAGCGTATAAACTCTTTGACAGACGGAAAACTCGATGGGATAGAACCAGAAGAGAATCAAATAAAGGCATTTCAGGAACAGGAAAGACAAAAAGTGCTTGAACTTTTAGACCAATATGTTCTCACTCTTACCCTGGAAGGGGCAGAGGCCAATAAAATATGGATTGAAATGGACAGTATTGAGAAAGGAATTCTACATGCTATTGCTCAACAGAATATCAGGTGGCTGGTCATGGGAGCATCAGGAGATATATATCGATCAGGTAAACTGGCAGAGGAAGGGTCCAAGAAAGCCGTTCTTGTGTTTGTGCAAGCATCAGTATCCTGTAATATTTGGTTCATTCACAAGGGTAACCTCATATATACAAGCGCAGATAGTAAAGATGTATCTGAAATTGAGAATGCTCCATCATTGTTGGTGCTTAGATCAAATACAGGAGGCAAACAATATGAGATAAGATCTGAATGTACTCCTAGTTCACAGAAATATTTAGATGCTGGAAAAATGGAAGGAATGCTCCGAAATTTTAGTTCCCATTGTTCCGTAGAATCAGTAAAATCAAGTACTAAGTTGACAGATTTGCTGTCTCTTGAGGATGACGCAAGAGAGCAAGATGGAAGACGAGAACTAGCTAATGTAGATGCTAGGAGCTTCAGATCAATAGAACTTGTAGGGGCAGTGGAGAGCAGCAATATAGAAGACAATAGTACTGTGGAGGCGGAAGCATTAGAAAGCTTGTGTGCGAATGAGACAAGTAGAAGAAGAGAACTTGAAGAACTATATGCTAGGGAAAAGCAAGAATTACAAAAGGTGAAAGATCAACAGGATGAAATAATGGGAAAACTACGAATGATCCAAGATCAAAATTCAGCACTTGATGGCCAAGTTGTTGAGTCCCAGACTGTGGTAGCAGAGTTGGAGGAGAAAATTTTATCAGCAGTTGAACTCTTGATAAGCTTCAAAGACAGACGAGATAAGTTAAAGATCGAGCATTCGAATGCTGTAAGGGAAGTAAACAAGTTGAGGAATTTTGTAAATGCAGATGCTGAATATCCTCATGGAACAGAATTTCCTACATTTTCATTCTTAGAGATTAATGAGGCAACTAATGATTTTGATCCATCCTGGAAGATTGGAGAGGGAAGGTATGGGAGTGTTTACAAAGGATTGCTTCGCAATATGCAAGTTGCCATAAAGATGTTGCCCTCTTATGGCTGTCAGAGCCAACTAGAGTTCCAACATCAGGTTGAGGTTTTGAGTAGGGTAAGACATCCAAACCTTGTAACACTGATTGGAAGCTGCACAGAATCTAGGTCACTTGTCTATGATTACCTTAATAATGGCAGCCTTGAGGACCACCTTGCCCGCAAAGACAAGACTCCACTTCCTTGGCAAATTCGAATATCCATTGCTGCTGACATATGCTCTGCTCTTATCTTCATTCATTCCTGTGAGCCTTGTATAATCCATGGGAATTTCAAGCCCAGTAAAATTCTGCTTGATGTAAACTTTGTGGCCAAACTTTGTGATTTGGGCATTTCTTCTTTGGTCCAGTTCAGTGGGCTTCCAGCTGACAGTAACAAAACAATTGATAACCGAAATGAAAGTTTGGTGTATGCGAATCCAGAAATTTTAACCCCTGGGAAGCTCACACCAGAATCTGATGTGTATTCGTTTGGAATCATATTGTTACAACTTTTAACTGGCAGACCTCTTTCAGGAATAGTAAGGGATACAAAATGTGCATTGGAGAAGCAAAATCTTAAAGCGGTATTGGACATTTCCGCTGGAGAATGGCCACTTTATCAAGTTGAACAGCTAGCATATTTGGCACTGAGGTGTTCTGAGAAGACTCAGCTGAACCGGCCTGACATCTTGTCAGAAATATGGAGTGTTCTTCGACCACTGCAAACTTCATGCAGTAACATGTCACCATATTCAACTTCCAAGAAGCTTCAACGTCCTCCTTCTCACTTTGTCTGCCCCATATTTCAGGAGGTCATGAAGGATCCTTATATAGCTGCAGATGGCTTTACATATGAAGAAGACGCAATAAGAGGCTGGTTGGATAGTGGTCACAACACTTCACCAATGACAAACCTCAAGCTTGAACACACCAACCTGGTGCCTAATTATGCATTACTTAATGCGATTCAGGAGTGGCGGCACCTGCAATGA 2346 0.4135 MGSTEGIGGECLEDVGLKETVYVAVGKNIEKSRQVLLWAVHNCADKKICVLHVHRPERINSLTDGKLDGIEPEENQIKAFQEQERQKVLELLDQYVLTLTLEGAEANKIWIEMDSIEKGILHAIAQQNIRWLVMGASGDIYRSGKLAEEGSKKAVLVFVQASVSCNIWFIHKGNLIYTSADSKDVSEIENAPSLLVLRSNTGGKQYEIRSECTPSSQKYLDAGKMEGMLRNFSSHCSVESVKSSTKLTDLLSLEDDAREQDGRRELANVDARSFRSIELVGAVESSNIEDNSTVEAEALESLCANETSRRRELEELYAREKQELQKVKDQQDEIMGKLRMIQDQNSALDGQVVESQTVVAELEEKILSAVELLISFKDRRDKLKIEHSNAVREVNKLRNFVNADAEYPHGTEFPTFSFLEINEATNDFDPSWKIGEGRYGSVYKGLLRNMQVAIKMLPSYGCQSQLEFQHQVEVLSRVRHPNLVTLIGSCTESRSLVYDYLNNGSLEDHLARKDKTPLPWQIRISIAADICSALIFIHSCEPCIIHGNFKPSKILLDVNFVAKLCDLGISSLVQFSGLPADSNKTIDNRNESLVYANPEILTPGKLTPESDVYSFGIILLQLLTGRPLSGIVRDTKCALEKQNLKAVLDISAGEWPLYQVEQLAYLALRCSEKTQLNRPDILSEIWSVLRPLQTSCSNMSPYSTSKKLQRPPSHFVCPIFQEVMKDPYIAADGFTYEEDAIRGWLDSGHNTSPMTNLKLEHTNLVPNYALLNAIQEWRHLQ 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2932 781 Pfam Universal stress protein family 21 138 IPR006016 -
Alju01g2932 781 PANTHER OS02G0152300 PROTEIN 20 776 - -
Alju01g2932 781 Gene3D Phosphorylase Kinase; domain 1 400 500 - -
Alju01g2932 781 ProSitePatterns Protein kinases ATP-binding region signature. 434 455 IPR017441 GO:0005524
Alju01g2932 781 Pfam U-box domain 712 778 IPR003613 GO:0004842|GO:0016567
Alju01g2932 781 SUPERFAMILY Protein kinase-like (PK-like) 408 682 IPR011009 -
Alju01g2932 781 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 24 138 - -
Alju01g2932 781 SMART Ubox_2 714 777 IPR003613 GO:0004842|GO:0016567
Alju01g2932 781 Coils Coil 296 337 - -
Alju01g2932 781 ProSiteProfiles U-box domain profile. 710 781 IPR003613 GO:0004842|GO:0016567
Alju01g2932 781 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 710 781 IPR013083 -
Alju01g2932 781 Gene3D HUPs 14 139 IPR014729 -
Alju01g2932 781 Gene3D Transferase(Phosphotransferase) domain 1 501 698 - -
Alju01g2932 781 SUPERFAMILY RING/U-box 702 778 - -
Alju01g2932 781 ProSiteProfiles Protein kinase domain profile. 428 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2932 781 CDD RING-Ubox_WDSUB1-like 712 767 - -
Alju01g2932 781 Pfam Protein tyrosine and serine/threonine kinase 433 681 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2932 Alju-ChrAlju01 39695733 39708638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2932 45 779 U-box Gene Family AT3G49060 44.072 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Alju01g2932 PK_Tyr_Ser-Thr 1.6e-35 CL0016