Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2886 ATGGCTGAAGGAGACTGGGATCTCTCCGCCGTGGTGCGAGGTTGCAGAACCTCCGCCGCCGCCGCGGCTACCAGCACCAAAACTCCACCACCGTCATCTTCTTCTTCTTCATCCAAGGGCGTTCCTTTACCATTAATCAAGCAAGAAAATGACGTCTTCTCTTTTCCCAGTTTGATTCAACCCACACCCAATGGGTTCCAAGAACTACACCAGTTGCTCAGACCCTTTATCCCCACCACCACCACCACCACAACCACCACTATCTCTACTAGTGGTTGTGGCATCTATCCCAATTCCTCTTTCACTGATTTTGCAGTTCCAGAGTCCTGTAGTAATAATATTAGTAATAATATAAATACTTCTGCATCTTCTTCCTACGCGTCCAACACTAGGCCTCATTTTGTGCCACAAGCCTCACCCTCCACTAGTTCGCCTTCTGGATCTCAAAGATTCCATGACCAACATATACAGCAACTCCAAAAACAAAAGCAAATTCAAGATCAACTACAACAACTAGTTCATCAGAAACAGCAATTTATAACACCACCAGGTCAAATCAGCAGCGGCGGTAGTAATAATTCTGGTATGACTTTACCAAATACGCAAACTGCTCAAGCAACAACCAGATCGAGAAAAAGAAAGAGTCAACAGAGAAGGATGGTTTGCCATGTAACAGCGGAAAACCTCACCGCAGATTCTTGGGCCTGGAGAAAATACGGTCAAAAGCCCATTAAAGGCTCTCCATATCCCAGATGTAGCAGTTCAAAAGGTTGTGGGGCCCGGAAGCAAGTGGAACGGAGCAATACTGAACCAGATATGTTCATCGTCACGTACACCGGAGAACATACGCATCCGCGACCTACCCATCGGAACTCGCTTGCCGGAAGTACTAGGAACAAACCGTCGTCGTTGACGACGACCCGTCAACCAGCCTCTCATGAATCTGGGTCACCAAGCACTACCCTTAACCGGGCATCGTCATCTTCACAGCTTTCTCCGACGACGCCTTTGACGGCGGTGGCGGCGAACGACGAGTGCTCCGATGAACCCATGTTAAGCAATGAAGCCAAGAGCCCTTTCCCTGAAGACGATTTAGACTTGGCCTCTCATGATGACATTTTGATACCAAACATGGCGGCCATGATGGATAACTTCTTGCTGGGTGCTGGTGAGCTTCACGGCGGAATCGGACTTAGTGGCGGTGGGGATAATAGCACAAGCAGCAATCCAGCGGATGGGTCGTATCCAAATACCAACCCGGGTTGA 1266 0.4882 MAEGDWDLSAVVRGCRTSAAAAATSTKTPPPSSSSSSSKGVPLPLIKQENDVFSFPSLIQPTPNGFQELHQLLRPFIPTTTTTTTTTISTSGCGIYPNSSFTDFAVPESCSNNISNNINTSASSSYASNTRPHFVPQASPSTSSPSGSQRFHDQHIQQLQKQKQIQDQLQQLVHQKQQFITPPGQISSGGSNNSGMTLPNTQTAQATTRSRKRKSQQRRMVCHVTAENLTADSWAWRKYGQKPIKGSPYPRCSSSKGCGARKQVERSNTEPDMFIVTYTGEHTHPRPTHRNSLAGSTRNKPSSLTTTRQPASHESGSPSTTLNRASSSSQLSPTTPLTAVAANDECSDEPMLSNEAKSPFPEDDLDLASHDDILIPNMAAMMDNFLLGAGELHGGIGLSGGGDNSTSSNPADGSYPNTNPG 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2886 421 MobiDBLite consensus disorder prediction 398 421 - -
Alju01g2886 421 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 361 IPR044810 GO:0003700
Alju01g2886 421 ProSiteProfiles WRKY domain profile. 225 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju01g2886 421 MobiDBLite consensus disorder prediction 400 421 - -
Alju01g2886 421 MobiDBLite consensus disorder prediction 242 335 - -
Alju01g2886 421 MobiDBLite consensus disorder prediction 19 43 - -
Alju01g2886 421 Gene3D WRKY domain 215 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju01g2886 421 MobiDBLite consensus disorder prediction 289 335 - -
Alju01g2886 421 SMART WRKY_cls 230 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju01g2886 421 Pfam WRKY DNA -binding domain 232 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju01g2886 421 MobiDBLite consensus disorder prediction 181 210 - -
Alju01g2886 421 MobiDBLite consensus disorder prediction 123 168 - -
Alju01g2886 421 MobiDBLite consensus disorder prediction 181 220 - -
Alju01g2886 421 SUPERFAMILY WRKY DNA-binding domain 224 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2886 Alju-ChrAlju01 36359872 36361377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2886 209 356 WRKY Transcription Factor Family AT5G52830 60.897 3.43e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju01g2886 WRKY 3.9e-19 CL0274