Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2845 ATGGGGAAGAACGAGTTTCTTACACCAAAGGCAATAGCTAATCGAATCAAAGCAAAGGGGCTGCAGAAGCTTCGGTGGTACTGCCAGATGTGTCAGAAACAATGTCGAGATGAGAATGGGTTCAAGTGTCATTGCATGAGTGAGAGTCACCAGCGTCAAATGCAGATCTTTGGACAAAACGCAAATCGGATAGTTGAGGGCTATTCTGAAGAGTTTGAGAACACCTTTCTTGAGCACATGAAACGCAGCCACCGGTTCAGTCGTATAGCAGCTACAGTAGTTTACAACGAGTACATTAGTGATAGACATCACATTCATATGAATTCCACTCGATGGCTTACACTAACTGAGTTTGTCAAGTATTTGGGTCGGACTGGAAAGTGTAAGGTTGAAGAAACGCCCAAGGGTTGGTTTATCACCTACATTGATAGGGATTCTGAGACTCTTTTCAAAGAGAGGATGAAGAATAAAAGAATAAAGTCTGACATGGCTGAAGAAGAGAAGCAAGAGAAGGAGATACAGAAACAAATAGAAATGGCCGAGCAGTTGATGCAGCCATCGGCCTCTGGATCTGATCAACCTTCACAGGATGAACTTCCTAGAGAGTTAAAAGTGGAAGATGGAGTTAAGATTGGCTTTTCTCTTGGTTCATCTGTAAAACCTGTAACCAATGATAAAAGGGAGGGACTGAAGGTATTGTTCAATGAGGTTGAGGATGCCAAAAAGGAAGAAAGGAAACCTGGAGGCTCTTTGAAGAGGAAAGAAAGTGGTGGTGGAAAATCAACATTGGACGAATTGATGCGAGAAGATGAGAAAAAAAGGGAAAAGATTAATAGAAAGGATTTCTGGTTGCACGAGGGAATTGTTGTCAAGGTCATGAGCAAAGCTTTGGCTGATAAAGGGTATTACAAGCAAAAAGGTGTTGTGAGAAAGGTGATCGATAAATATGTTGGGGAAATAGAAATGATTGAAAGCAAGCATGTGCTCAGAGTTGATCAGGCAGAGCTTGAAACTGTAATCCCCCAAGTTGGTGGTCTTGTTAAGATCGTAAACGGAGCTTATCGTGGATCTACAGCGAGATTGTTAGGGGTTGATACTGATCACTTTTGTGCCAAAGTGCAGATTGAGAAAGGTCCTTACGATGGCAGAGTCCTCAAGGCAGTGGAATACGAGGATATTTGCAAATTGGCCCAGATGATTTTCATGACCATTTTTACTTTTTTAACTTTCTTGACCTTGACAAGATATGAATACGACAATCTTCTCAAATTGGTGACAAGTGACAATTGA 1290 0.4163 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGQNANRIVEGYSEEFENTFLEHMKRSHRFSRIAATVVYNEYISDRHHIHMNSTRWLTLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIKSDMAEEEKQEKEIQKQIEMAEQLMQPSASGSDQPSQDELPRELKVEDGVKIGFSLGSSVKPVTNDKREGLKVLFNEVEDAKKEERKPGGSLKRKESGGGKSTLDELMREDEKKREKINRKDFWLHEGIVVKVMSKALADKGYYKQKGVVRKVIDKYVGEIEMIESKHVLRVDQAELETVIPQVGGLVKIVNGAYRGSTARLLGVDTDHFCAKVQIEKGPYDGRVLKAVEYEDICKLAQMIFMTIFTFLTFLTLTRYEYDNLLKLVTSDN 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2845 429 Gene3D - 60 160 IPR038254 -
Alju01g2845 429 CDD KOW_KIN17 343 396 IPR041995 -
Alju01g2845 429 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 397 IPR037321 -
Alju01g2845 429 FunFam DNA/RNA-binding protein KIN17, putative 341 397 - -
Alju01g2845 429 Pfam KN17 SH3-like C-terminal domain 279 332 IPR041330 -
Alju01g2845 429 SUPERFAMILY beta-beta-alpha zinc fingers 26 60 IPR036236 -
Alju01g2845 429 MobiDBLite consensus disorder prediction 239 271 - -
Alju01g2845 429 SMART Kin17_mid_2 52 178 IPR019447 -
Alju01g2845 429 Coils Coil 154 183 - -
Alju01g2845 429 Gene3D - 341 397 IPR014722 -
Alju01g2845 429 Gene3D - 287 340 - -
Alju01g2845 429 FunFam DNA/RNA-binding protein KIN17, putative 61 160 - -
Alju01g2845 429 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Alju01g2845 429 FunFam DNA/RNA-binding protein kin17-like 287 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2845 Alju-ChrAlju01 33033397 33034817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2845 1 397 C2H2 Transcription Factor Family AT1G55460 71.845 0.0 588