LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju01g2840	ATGCCTTTCCTTCCTGAAAACTATAATGAGGAGGTTACCACCATTGATTGGGAAACTCTAGCCATATTAATATTAATCGCTCTCTCTCTCTCTCTCTCTCTCTGTGCAGAAACAGCTCATGATACTAAAACAAAACTCATCTCTGCAATAATAATGAGGCCTCTTCTTATTCTCTCAGTTCTATCGTCTATTCTTGTTCTCTTCTCTTACAATGCAGGGGCTTATGATCCTTTGGATCCAAATGGAAATATAACGATCAAATGGGATGTTATGTCTTGGACTCCTGATGGTTATGTGGCAACAGTAACAATGCACAACTTCCAAATGTACCGTCACATAATGAACCCAGGATGGACCTTAGGGTGGTCATGGGCAAAGAAGGATGTGATATGGTCAATGGTTGGAGCTCAAACCACAGAGCAAGGAGACTGTTCTAAGTTCAAAGGCAATGTCCCACACTGCTGCAAGAAGACTCCAACAGTGGTGGACCTTCTTCCTGGGGTACCCTACAACCAGCAATTCACTAATTGTTGTAAAGGTGGGGTCGTCCCTGCGTGGGGCCAGGACCCTAATGGGGCCCTCTCCTCCTTCCAGGTCAGCGTTGGCCAGGCTGGTACTTCTAATAAGACTGTTAAGTTGCCTAAGAACTTCACCCTCCTTGCTCCTGGTCCTGGTTATACTTGTGGCCCTGCTAAGGTTGTTCCTTCTACAGTGTTTCTTACTCCTGACAAGCGTCGGAAGACTCAAGCTCTCATGACATGGAACGTAACCTGCACTTACTCACAATTCCTTGCAAGGAAGAACCCAAGTTGTTGCGTGTCTCTCTCATCATTTTACAACGAAACAATCACGCCATGTCCAGCATGTGCCTGTGGCTGCCAGAACAAGAAGAACTGTGTCAAGAGTGACTCCAAATTTCGCAACGATAAACGGCTTCACAGTACAAAGAAAGAGAACGACCAGTTGTTACAGTGTACTCATCACATGTGCCCTATCAGAGTACATTGGCACGTGAAGCTCAACTATAAAGACTATTGGCGAGTCAAGATTGCCATAACAAATTTCAATTACAAGATGAATTACTCTCTTTGGACTCTTGCTGTTCAACACCCAAATCTCAACAATGTCACACAAGTTTTCAGCTTTGATTACAAGCCTCTTGTTCCCTACGAGTCTGTCAACGATACTGCCATGTTCTATGGCATGAAGTACTATAATGATCTATTAATGGAAGCTGGGCCATCTGGGAATGTTCAATCTGAAGTGCTTATGAGAAAGAACAAGGACACTTTTACCCTCAAACAGGGATGGGCTTTCCCTCATAAGGTTTATTTCAATGGAGATGAGTGCATGTTGCCTCCACCTGATTCATACCCAATTCTCCCTAATTCTGCTTCTCTAAACCTTTTCACTTTCCCAATATTCATCCTCTCTTTCCTCTTCTTCATCTTTTTTCTTTGA	1461	0.436	MPFLPENYNEEVTTIDWETLAILILIALSLSLSLCAETAHDTKTKLISAIIMRPLLILSVLSSILVLFSYNAGAYDPLDPNGNITIKWDVMSWTPDGYVATVTMHNFQMYRHIMNPGWTLGWSWAKKDVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVVPAWGQDPNGALSSFQVSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTVFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPACACGCQNKKNCVKSDSKFRNDKRLHSTKKENDQLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYKMNYSLWTLAVQHPNLNNVTQVFSFDYKPLVPYESVNDTAMFYGMKYYNDLLMEAGPSGNVQSEVLMRKNKDTFTLKQGWAFPHKVYFNGDECMLPPPDSYPILPNSASLNLFTFPIFILSFLFFIFFL	486

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju01g2840	486	PIRSF	COBRA	45	486	IPR006918	GO:0010215\|GO:0016020
	Alju01g2840	486	Pfam	COBRA-like protein	98	261	IPR006918	GO:0010215\|GO:0016020
	Alju01g2840	486	PANTHER	PROTEIN COBRA	63	478	IPR006918	GO:0010215\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju01g2840	Alju-ChrAlju01	32991194	32998867	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju01g2840	74	482	COBRA Gene Family	AT3G29810	67.391	0.0	605