Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2792 ATGAACAACGTTAACAATAGAACTTCATCAAAAGAAGCAGCAGATTTCTCACTAAAACAGGAAAATCAGCATGACAAAACGAAGAAGGCTTCAACGTCATCAACAACAAGAAGAAGCAGCAGCTTAACAGTATCATCATCACAATGGCTAAGATCAAAGGACCCGAGGATTGTTCGTGTTTCGCGAGCCTTCGGAGGCAAAGATCGTCACAGCAAGGTTTGCACAGTTAAAGGACTGAGAGATAGACGAGTGAGACTCTCAGTATCCACAGCTATTGAGCTATATGATCTTCAAGATAGGTTAGGGTTCAATCAGCCCAGTAAGGTTGTGGATTGGTTGCTTGATGCAGCTAAACATGAAATTGATGAACTCCCACCACTCCAAATTCCTCCTGGAAGCTTCAGTAATTTCTGTCACCAACCAGTAACCTCCATGAACAATCAAATTATTACAAGCACTTCTCAGCAAAATGAACAAGGGTTTAACACCATGGAAGGTTCAAACTCAGTCATGTCCAAGTCTAAAGGAGAAGTGGCTATTGATGAAGAGAAAGCAAATTGGAATAGAAGAGAAGAAGAAGAGGATAGAACCAATCATCATCCTTCTTTTCTGGGTTTGTTGAACACTATGCCTCAACTTGGTTATAATGTTAATAATAACCAATGGGAGGCTAATTCAAACCTTGGATTTGCAAACCAACAGACAGATTTGCACAGCAATAGTACCAACGTTGTACCTTTCTCAGGATTATCATCAAACTTGTCTTTATCAACTGGAACAATAGCTCAGACATATTTTCCTTCACATTTTGGGGCAATAATGGACATGGAACCAAGCAGGCCGATGAATCAGTATCAGATGTTGATGAGTTCATCAAATTCTCTGATGAATCCTTCGGTTGTTAATAATACTACAAGCCAACAACTACCTACGAAGCCATTCAGCTTTGCTATGATGATGACTCCTAAACTTCTCCGATCACCAAACAGCAGTGAAACACAACCTCGTAATAAAGACCAGGTTTTTCCTTCCAAGTGA 1038 0.4017 MNNVNNRTSSKEAADFSLKQENQHDKTKKASTSSTTRRSSSLTVSSSQWLRSKDPRIVRVSRAFGGKDRHSKVCTVKGLRDRRVRLSVSTAIELYDLQDRLGFNQPSKVVDWLLDAAKHEIDELPPLQIPPGSFSNFCHQPVTSMNNQIITSTSQQNEQGFNTMEGSNSVMSKSKGEVAIDEEKANWNRREEEEDRTNHHPSFLGLLNTMPQLGYNVNNNQWEANSNLGFANQQTDLHSNSTNVVPFSGLSSNLSLSTGTIAQTYFPSHFGAIMDMEPSRPMNQYQMLMSSSNSLMNPSVVNNTTSQQLPTKPFSFAMMMTPKLLRSPNSSETQPRNKDQVFPSK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2792 345 ProSiteProfiles TCP domain profile. 66 124 IPR017887 -
Alju01g2792 345 MobiDBLite consensus disorder prediction 325 345 - -
Alju01g2792 345 MobiDBLite consensus disorder prediction 1 47 - -
Alju01g2792 345 MobiDBLite consensus disorder prediction 33 47 - -
Alju01g2792 345 MobiDBLite consensus disorder prediction 17 32 - -
Alju01g2792 345 MobiDBLite consensus disorder prediction 1 16 - -
Alju01g2792 345 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 308 IPR005333 GO:0003700
Alju01g2792 345 Pfam TCP family transcription factor 66 196 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2792 Alju-ChrAlju01 30387505 30388542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2792 20 140 TCP Transcription Factor Family AT3G02150 66.667 3.97e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju01g2792 TCP 5e-31 No_clan