Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2763 ATGAATTCTGAAGCTCTTGCCAATGATTTTTCCCTGGACCCTTTGGAACGTTACGCTGAAGCTTTCATGGAAGCAGATGATGATCTGCCAACATCACCCCCTACTGAGTTTTTTCAGCAACTGTATGATTGCATTAGTGGCGATACCGTTGATGACCTGGTTGAAGATCAAACTGGGGAAGTTTTGCTTCCCATGGATGAAAGTGACCCACTATCATCGACCAGTGATGTGTATTCTTTGATTGATTTTGAATCCAAATATTCCCCAAACCAAACTAATAATTTGGAAGATCTTCCTGACGACCCTACTTCTCAACTCTTGGAATTGGGAGCTCCTCCAACGGATATGTCTCAGCCTTTGGAAGTAGAAGTTCCTGGAAGCCATGCTAGTTCTCAACCCTTGGAATTGGGAGCTCCTCCAACGGATATGCCCCAGACTTTGGAATCAGAAGTTCCTGGAAGCCATGCTAGTTCTCAATCTTTGGAATTGGGAGCTCCTCAACCAAACCAAACTTCTCAATCTTTAGAAGTGCAAGTTTTTCCGGATGTCTCTGCTTCACCATCTTTCCTAAATGGTTCGAATCAGCAACATCGTCTTCATGCCCAACAATATCAAAATGTGCCAACTCCTCAATTTTGTGGCTATTATCACCAATTCATCCAATCACCAGCTCCCTCAAATAAGTTGCCGGGACCTAGAATAAGTTGTCACTGCAAAAAGACAGCATGTTTAAAGGGATATTGCTCATGCTATAAGGCTAAAGTTGGATGTTCTGACATGTGCCAATGCGAAGGTTGTGGTAATACCTATGGCTGCAAAAACGGTGGAATCACATCAACTTTTAACTCTAGTGCAGCTCAAAGTGATCTTCCAAGTAACAATATTTCTTTAGTCAATGAGAAGCCACTGGGTGGTGGATTGGACACACTCACTCATAACAGCTTAAATATATGTTCAAATCAAAATACAGTGTACGGAGCACCTACCTTGAATCAATTTGCTACACCACCGGCTGTCCAAATGGCTCAACTGCCAGCAAATCTGTTTGCTGCACCGTCAGCCGTCCAAATAGTCAACGTGGCTCATTCGCAAGAAAATTCATTTGCCCTATCAAGCAACATCTCTCCACCGCAGGCTGTCCATAAGGCTGCCAACGCTCAGCTGCAGGCAAATCCATTTGCCCCAACATACACTGCTTATCAGCTTCAGCAGCAGCGTATGTTGATGAACTCAGCTAATTCCTTTGTTAATGACGTGACTTATGGGGTGTTTCGTGGGAATGCTGTTTCGAGAACACCATTAAAGCAACTACCTCCAAGATTCCGTAAAGAAGTCAACGACATATATTGGAAGCATCTCCCAAGGGAATAA 1371 0.4362 MNSEALANDFSLDPLERYAEAFMEADDDLPTSPPTEFFQQLYDCISGDTVDDLVEDQTGEVLLPMDESDPLSSTSDVYSLIDFESKYSPNQTNNLEDLPDDPTSQLLELGAPPTDMSQPLEVEVPGSHASSQPLELGAPPTDMPQTLESEVPGSHASSQSLELGAPQPNQTSQSLEVQVFPDVSASPSFLNGSNQQHRLHAQQYQNVPTPQFCGYYHQFIQSPAPSNKLPGPRISCHCKKTACLKGYCSCYKAKVGCSDMCQCEGCGNTYGCKNGGITSTFNSSAAQSDLPSNNISLVNEKPLGGGLDTLTHNSLNICSNQNTVYGAPTLNQFATPPAVQMAQLPANLFAAPSAVQIVNVAHSQENSFALSSNISPPQAVHKAANAQLQANPFAPTYTAYQLQQQRMLMNSANSFVNDVTYGVFRGNAVSRTPLKQLPPRFRKEVNDIYWKHLPRE 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2763 456 MobiDBLite consensus disorder prediction 88 173 - -
Alju01g2763 456 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 235 269 IPR005172 -
Alju01g2763 456 ProSiteProfiles CRC domain profile. 236 271 IPR005172 -
Alju01g2763 456 SMART CXC_2 231 272 IPR033467 -
Alju01g2763 456 MobiDBLite consensus disorder prediction 147 173 - -
Alju01g2763 456 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 235 382 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2763 Alju-ChrAlju01 29520806 29524667 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2763 236 283 CPP Transcription Factor Family AT3G22780 50.000 1.69e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Alju01g2763 TCR 7.4e-10 No_clan