Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2745 ATGATGAAGAGAATCACTCTCTCACACATTCTCATCTTCACCCTTCTAACACCGGCCGTTGATTCCATGTTAGATCGGCAACGGCTAGGTTCTTATCCTAAATTTTCACGAATCCTCAACTGGGACCCATCACACGCTCCCGTTTTTGCGGCCCTCATCTGTTCCTTTTTGTTCGTCATCTTCTTCTCCATCTACGTCCGTTACTGTTACGACTCCGACCAAGTCGCCACCCGAGACCTGACCGGCAACTCGGCCACGGCGGATTGTTCTTCCTCTAGTCGTCAAGGCATAGACCCAAAATTACTCGACACCTTCCCCATCCTTGCCTATTCCAGCATCAAACCCCTCAGGCTTGATGATAGTTCAACGCTGGAATGTGCCGTGTGCTTGAGCGAGTTCGATCACCATGACTCTCTCCGATTGCTTCCGATATGTAACCACGTGTTTCACCCTCAGTGCATAGATACCTGGTTAGGCTCTCACGTGACTTGCCCCGTTTGTCGCTCGAGGCTGACGCCGGAGCACCACGACGGTGGTGACAATGACAACGGCCACGATGTTGTGATAATAATTCCGGAGGAGGTAAATTCACAACATGAGTTAGATGAAAGTTCTGCTAGTAGTAGAAGAACAGAGTTTAATTCAGGAGAAAGAAGTTTGGGGAGGTCTCATTCTACGGGTCACTCTCTGAGTTTGGTTGAAACAGTAGGGAATGACGTGGAGAGGTATACTCTGAGGTTATCGGAGGATGTGAGGAAGTAA 762 0.4908 MMKRITLSHILIFTLLTPAVDSMLDRQRLGSYPKFSRILNWDPSHAPVFAALICSFLFVIFFSIYVRYCYDSDQVATRDLTGNSATADCSSSSRQGIDPKLLDTFPILAYSSIKPLRLDDSSTLECAVCLSEFDHHDSLRLLPICNHVFHPQCIDTWLGSHVTCPVCRSRLTPEHHDGGDNDNGHDVVIIIPEEVNSQHELDESSASSRRTEFNSGERSLGRSHSTGHSLSLVETVGNDVERYTLRLSEDVRK 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2745 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 174 IPR013083 -
Alju01g2745 253 FunFam E3 ubiquitin-protein ligase ATL6 85 174 - -
Alju01g2745 253 Pfam Ring finger domain 125 168 IPR001841 -
Alju01g2745 253 ProSiteProfiles Zinc finger RING-type profile. 126 168 IPR001841 -
Alju01g2745 253 MobiDBLite consensus disorder prediction 198 233 - -
Alju01g2745 253 SUPERFAMILY RING/U-box 116 174 - -
Alju01g2745 253 MobiDBLite consensus disorder prediction 208 233 - -
Alju01g2745 253 CDD RING-H2_EL5-like 125 168 - -
Alju01g2745 253 PANTHER RING FINGER DOMAIN-CONTAINING 47 175 - -
Alju01g2745 253 SMART ring_2 126 167 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2745 Alju-ChrAlju01 28806803 28807564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2745 11 253 Rapid Response to Elicitors AT3G05200 35.938 3.41e-44 151