Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2744 ATGATCAGAATCACGCCATTACACATCCTTCGCTTGCTGCTACAATCGTGGGCCGCCGCCGCCGCCGTTGACCGGTCAGCTTCTTCCCCGCCGGCAGCTCCTCCTCTTGCTCAACTCCACGACACGGACCCATCCTTCGTTCCCATAGCTGTGGCCTTTGGTTGCATCTTATTGTTTGTAGGCTTCTTCACCATCTACCTCTGGTATTGCGCCGAAACGAGCTTTGCCGCCGCCGTCGGAGACCCAACCAGAGCCTTCACCACATGCTGTTCTTGCGGTCCTCACGGTATCGACCGGAAAATATTAGACACTTTACCCATCCTCACCTATTCCACGATCACACACCTTAAACCTCAGATTGTTCCATTAGAGTGTACGGTGTGCTTGAGCGAGTTTAATCACCATGACACTCTCCGATTGCTTCCCAAATGTAACCATGCCTTTCACCGTGACTGTATCGACAAATGGTTAGCCTCACATATGACTTGTCCGGTTTGCCGCACGCGGCTGTCAAAGTCGTCCTTTCACCACCACCACCACCACCATCGTGGTGACAACGAGGAAGTTATTGCGGCGGCGATGATGATTCCGAATAATGAGGAAAATAATGCACACCGGGAGGTCGATGAAAGTTCTGTAAGTAGAATGAATTATGTTCTTAGTTTTGGAGACACAAGTTTTAGAAGGTGTCATACAACGGGTTACTCTTTGGGTGTTGGATTGCCGCAGGACAATGTGAGTCAACAAATTCCGGCGAATTATGGCAGGTCGGCGAGCGACGGAGGTAGTAGAGAGAGGTTGGGTCATTCATTGACACCTCCAGTTGTTTCTCATGCAAATGTGTTGCCTTCTTCTTCTTCCTCACCTCAACATATTGCATTACAGTTCGAAAGGAGAAGTATATGA 906 0.4956 MIRITPLHILRLLLQSWAAAAAVDRSASSPPAAPPLAQLHDTDPSFVPIAVAFGCILLFVGFFTIYLWYCAETSFAAAVGDPTRAFTTCCSCGPHGIDRKILDTLPILTYSTITHLKPQIVPLECTVCLSEFNHHDTLRLLPKCNHAFHRDCIDKWLASHMTCPVCRTRLSKSSFHHHHHHHRGDNEEVIAAAMMIPNNEENNAHREVDESSVSRMNYVLSFGDTSFRRCHTTGYSLGVGLPQDNVSQQIPANYGRSASDGGSRERLGHSLTPPVVSHANVLPSSSSSPQHIALQFERRSI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2744 301 CDD RING-H2_EL5-like 124 167 - -
Alju01g2744 301 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 176 IPR013083 -
Alju01g2744 301 ProSiteProfiles Zinc finger RING-type profile. 125 167 IPR001841 -
Alju01g2744 301 MobiDBLite consensus disorder prediction 248 271 - -
Alju01g2744 301 FunFam E3 ubiquitin-protein ligase ATL6 85 173 - -
Alju01g2744 301 Pfam Ring finger domain 124 167 IPR001841 -
Alju01g2744 301 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 33 199 - -
Alju01g2744 301 SMART ring_2 125 166 IPR001841 -
Alju01g2744 301 SUPERFAMILY RING/U-box 101 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2744 Alju-ChrAlju01 28763627 28764532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2744 7 237 Rapid Response to Elicitors AT3G05200 33.058 9.43e-30 114