Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2739 ATGAGCAAGAGAATCACACTCACAAACATCGTCGTCTTCTTACTTCGATTGGCGGCCGTCGTCGATGCCCAGTCAAGTTTACCCCGCAACCGGGACCCATCCTTCGATCATGAGCTTGTGGCCCTCGTTTGCGTCTTCTTGTTCGTCGCCTGCTGCTCCATCATAGTCCGCCACTGCTCCAACATGACCCTCGCCGCCGGCGCCACCACTAATTGTTCGTCAAGTGGTCCTCAAGGTATCGACCCAGAATTACTCAACACCTTCCCCATCCTCGTGTATTCCGCCGTGAAATACCTCAAATTTGGGAAAGCCGCGAACGAATGTGCGGTGTGCTTGATCGAGTTCGGTCAACACGATACGCTCCGATTGCTTCCGAAATGTAGCCATGTGTTTCACCATCAGTGCATTGATGCCTGGTTGGCCTCCCACGTGACTTGCCCTGTGTGTCGCTCGAGGATGAAGCCGGCGGAGGAGCATGGCGGAGGTGGAAACGAAGTCGTAATAGTAATCCCGCCTGAGGTATATGCTCACCAGGTGTTTGATGAAAGTTCTGAGAGTAGAGCGGAGCTTAATTCAGGAGACCTAAGAAATTTGGGGAGGTGTCATTCAACGGGTCACTCACTGGGTTTTGATGAAATTGGAGGGAAGAACACGGAGAGGAACACTGTTAAGATTTTGGAGGATGTAAAGAAAGAGATTAAGATCAATCACGGACGAATACGGCGGTCGGCGAGCTACGATGTGCTCCTTGGACGGCCGGGTGAACAGGAAAGCAGAGAGCATTTGATTCTTTGA 795 0.517 MSKRITLTNIVVFLLRLAAVVDAQSSLPRNRDPSFDHELVALVCVFLFVACCSIIVRHCSNMTLAAGATTNCSSSGPQGIDPELLNTFPILVYSAVKYLKFGKAANECAVCLIEFGQHDTLRLLPKCSHVFHHQCIDAWLASHVTCPVCRSRMKPAEEHGGGGNEVVIVIPPEVYAHQVFDESSESRAELNSGDLRNLGRCHSTGHSLGFDEIGGKNTERNTVKILEDVKKEIKINHGRIRRSASYDVLLGRPGEQESREHLIL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2739 264 SMART ring_2 108 149 IPR001841 -
Alju01g2739 264 FunFam E3 ubiquitin-protein ligase ATL6 68 156 - -
Alju01g2739 264 Pfam Ring finger domain 106 150 IPR001841 -
Alju01g2739 264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 156 IPR013083 -
Alju01g2739 264 CDD RING-H2_EL5-like 107 150 - -
Alju01g2739 264 PANTHER RING FINGER DOMAIN-CONTAINING 27 153 - -
Alju01g2739 264 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Alju01g2739 264 SUPERFAMILY RING/U-box 102 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2739 Alju-ChrAlju01 28551980 28552774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2739 11 249 Rapid Response to Elicitors AT3G05200 36.765 1.45e-38 137