Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2738 ATGATGCAGAGAATCAGAGCCTCGCAGATCCTCGTCTTCTTCCTCCTATCATCGGCCGTCGATGCCCAGTCAAGTTCCACGCCGGCGTCTTCTCCGAATGCTCCAATTCACACTTGGGATGTGTCTTTCGCCCCCGTGATTGTGGCCGTTACTTGCGCCTTCTTCTTCATCGTCTGTTTCGCCATATACCTCCACCACTGCTCCGATATGGAACTCGCCACCGGAGACCTGACTGGCGTCACAACCAATTGTTCTTCAAGTGGTACTCAAGGTATTGACCCAAAATTACTCGACTCCTTCCCCATCCTCGTTTATTCCGCCGCGAAAAACCTCAAATTTGGGAAATCCGCCGTGCTGGAGTGTGCCGTGTGCTTGAGCGAGTTCGACCACCACGATACGCTCCGATTGCTTCCGAAATGTAACCACGTATTTCACCCTCAGTGCATCGATGCCTGGTTTGCCTCCCACGAGACTTGCCCTGTTTGTCGCGCGCGGCTGAAGCCGGAGGAGGAGGACCGGCAAGGTGAAAACGAAGTCGCGATAGTAATTCCGAATGAGGTAAATTCAGTCACACCAGGTGTTCGATGA 588 0.5323 MMQRIRASQILVFFLLSSAVDAQSSSTPASSPNAPIHTWDVSFAPVIVAVTCAFFFIVCFAIYLHHCSDMELATGDLTGVTTNCSSSGTQGIDPKLLDSFPILVYSAAKNLKFGKSAVLECAVCLSEFDHHDTLRLLPKCNHVFHPQCIDAWFASHETCPVCRARLKPEEEDRQGENEVAIVIPNEVNSVTPGVR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2738 195 CDD RING-H2_EL5-like 120 163 - -
Alju01g2738 195 SMART ring_2 121 162 IPR001841 -
Alju01g2738 195 SUPERFAMILY RING/U-box 120 171 - -
Alju01g2738 195 FunFam E3 ubiquitin-protein ligase ATL6 80 169 - -
Alju01g2738 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 173 IPR013083 -
Alju01g2738 195 PANTHER RING FINGER DOMAIN-CONTAINING 26 167 - -
Alju01g2738 195 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Alju01g2738 195 Pfam Ring finger domain 120 163 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2738 Alju-ChrAlju01 28541408 28541995 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2738 11 177 Rapid Response to Elicitors AT3G05200 41.379 3.51e-38 134