Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2736 ATGATAAAGAGAATCACACCCTCACACATCTTCGTCTTCGTGCTTCTCTCGCCGACGGTCGGTGCCCAGTCAAGTCCGGCACCGGCGGCTTCTCCAAATGCTCCACTTCATACTCACCATGTATCGTTCACTCCGGTGATTTTTACCCTCCTTGGCGCCTTCTTCTTCGTCGGCTGCTTCGCCATCTACCTTCACCACCGCTCCTCCATGGAAATCACCGCCGGAGACCCAACGGCCGTCACCGACGACTGTTCTCCAAGTGCTCCTCGAGGTATCGACCCAAAATTACTCGACAGCTTCCCCACCCTCGTGTATTCCGCTGTGAAAAACCTCAAATTTGGGAAAGCCACCGCCGCGCCGGAGTGTGCCGTGTGCTTGGTTGAGTTCGACCACCATGATAATCTCCGATTGCTTCCGAAATGTAACCACATGTTTCACCTTCAATGTATCGACGCCTGGTTGGCCTCCCACGTGACTTGCCCCGTTTGTCGTTCAAGGCTGAAGCCGGCGGAGGAGCACCGCCGGGGATAA 531 0.5556 MIKRITPSHIFVFVLLSPTVGAQSSPAPAASPNAPLHTHHVSFTPVIFTLLGAFFFVGCFAIYLHHRSSMEITAGDPTAVTDDCSPSAPRGIDPKLLDSFPTLVYSAVKNLKFGKATAAPECAVCLVEFDHHDNLRLLPKCNHMFHLQCIDAWLASHVTCPVCRSRLKPAEEHRRG 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2736 176 SMART ring_2 122 163 IPR001841 -
Alju01g2736 176 Pfam Ring finger domain 121 164 IPR001841 -
Alju01g2736 176 ProSiteProfiles Zinc finger RING-type profile. 122 164 IPR001841 -
Alju01g2736 176 PANTHER RING FINGER DOMAIN-CONTAINING 25 167 - -
Alju01g2736 176 FunFam E3 ubiquitin-protein ligase ATL6 81 170 - -
Alju01g2736 176 CDD RING-H2_EL5-like 121 164 - -
Alju01g2736 176 SUPERFAMILY RING/U-box 121 169 - -
Alju01g2736 176 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 170 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2736 Alju-ChrAlju01 28456167 28456697 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2736 10 167 Rapid Response to Elicitors AT3G05200 42.331 7.68e-36 127