Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2734 ATGATCAATAGAGTCCCACATTCATACATCCTCATCTTCTTGCTTCTCTCATCGGCCGTCCATGCCCAGTCAAGCTTGCCACCTCCGGCGGCGGCCGCTTCTCCTAATTATAATGGTACACTCCCAAACAAGATTCCATCATTGGATCCAACGATTTTAGCTATCATTTGCGTCTTCTTGTTTGTCGGCTGCTTCTCCATCTACCTCCGCTGTAGTGCCACCACCGCTAATTTTCACCCAACTCAGCCTCAAGAAGGTATCGACACACAATTACTCAACACCTTCCCCATCCTCCCGTACTCCGCCGTTAAGCAGCTCAAATTTGGTAGTGCGGCGTCGGACTGTGCAGTGTGCTTGACGGAGTTCGACCACCACGATAAGCTCCGATTGCTTCCGAAATGTAACCACGTGTTTCACTCTCAATGCATCGACATCTGGTTGGCCTCCCACGTGACTTGCCCTGTGTGTAGGGCGAAGCTGAAGCCGGCGGAGGAGTGCCGCCACCGTGGTGTAAACGAAGTTGTGATAGTAATTCCGAACGAGGTTCTAAATCTACACCATGTGTTCGATGAAAGTTCTGTAAGTGGAACGGAGGTTAATTCAGGAGACAGAAGAAGTTTAGGGAGGTGCCATTCAACGGGACATTGTGTAGTATTGTGTAAAACCGGAATGAAGGGCACGCCGGATAGATACAATCTCAGGTCGGAGGAGAAGAGGAGAAAGATTACAGCCCATCACGGAGGAATGCGGCGGTCGGTGAGCTACGACGTGTTCCGTTGA 780 0.5051 MINRVPHSYILIFLLLSSAVHAQSSLPPPAAAASPNYNGTLPNKIPSLDPTILAIICVFLFVGCFSIYLRCSATTANFHPTQPQEGIDTQLLNTFPILPYSAVKQLKFGSAASDCAVCLTEFDHHDKLRLLPKCNHVFHSQCIDIWLASHVTCPVCRAKLKPAEECRHRGVNEVVIVIPNEVLNLHHVFDESSVSGTEVNSGDRRSLGRCHSTGHCVVLCKTGMKGTPDRYNLRSEEKRRKITAHHGGMRRSVSYDVFR 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2734 259 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 165 IPR013083 -
Alju01g2734 259 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Alju01g2734 259 CDD RING-H2_EL5-like 114 157 - -
Alju01g2734 259 Pfam Ring finger domain 114 157 IPR001841 -
Alju01g2734 259 PANTHER RING FINGER DOMAIN-CONTAINING 35 160 - -
Alju01g2734 259 SUPERFAMILY RING/U-box 114 167 - -
Alju01g2734 259 SMART ring_2 115 156 IPR001841 -
Alju01g2734 259 FunFam E3 ubiquitin-protein ligase ATL6 75 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2734 Alju-ChrAlju01 28421507 28422286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2734 11 258 Rapid Response to Elicitors AT3G05200 33.333 4.67e-35 127