Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2733 ATGATCAAAAGAATCACTCTCTCACACATTCTCGTCTTCTTGATTCTCTCGTCGGCCGTCGATGCCCAGTCAAGTTTGCCGCCACCGGTGGCGCCTTCTCCGAATGCTACACTCCCAAACCGGGTCCCATATTTGGATCCCATGGTTGTGGTCCTCGTTTGCGTCTTCTTTCTTGTAGGCTGCTTCGCCGTCTTCCTCCACCACTGGTCCAACATCCTCCTCAGCCAGAGTGCCACCACCGCTAATTTTCACTCAACTCGACCTCAAGGTATCGACCCACAATTACTCAACACCTTCCCCATCCTCCCGTGCTCCGCCGTTAAGCAACTCAAATTCGACAGTGCGGCGGCGCCGGAGTGTGCCGTGTGCTTGGCCGAGTACGACCACCACGATCAGCTCCGATTGCTTCCGAAATGTCACCACGCGTTTCACTCTGAATGTATTGACGCCTGGTTGGCCTCCCACGTGACTTGCCCTGTGTGTCGCGCCAGGCTGAAGCCGGTGGAGGAGGAGCGCCACCACCGTAGTGGAAACGATGTTGTTATAGTAATTCCGAGTTAG 561 0.5526 MIKRITLSHILVFLILSSAVDAQSSLPPPVAPSPNATLPNRVPYLDPMVVVLVCVFFLVGCFAVFLHHWSNILLSQSATTANFHSTRPQGIDPQLLNTFPILPCSAVKQLKFDSAAAPECAVCLAEYDHHDQLRLLPKCHHAFHSECIDAWLASHVTCPVCRARLKPVEEERHHRSGNDVVIVIPS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2733 186 FunFam E3 ubiquitin-protein ligase ATL6 79 168 - -
Alju01g2733 186 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 33 171 - -
Alju01g2733 186 Pfam Ring finger domain 119 162 IPR001841 -
Alju01g2733 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 79 168 IPR013083 -
Alju01g2733 186 CDD RING-H2_EL5-like 119 162 - -
Alju01g2733 186 ProSiteProfiles Zinc finger RING-type profile. 120 162 IPR001841 -
Alju01g2733 186 SUPERFAMILY RING/U-box 119 168 - -
Alju01g2733 186 SMART ring_2 120 161 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2733 Alju-ChrAlju01 28415605 28416165 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2733 11 165 Rapid Response to Elicitors AT3G05200 36.810 1.32e-28 108