Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2718 ATGGAGGGCCATGGTGATATGGGCCTTATTGGGGAATTTGATCATAGTTTGATGGGTAGGATGAGGGATGACGAGTATGAGAGTCGGTCTGGGAGTGATAATTTCGAAGGAGTTTCCGGCGACGATCAGGATGCCGGTGGTGGCGGTGGTGATGATCAGTCTAAGAGAAGAAAGAAATATCACAGACACACTCCTCATCAAATTCAAGAGCTTGAAGCATTTTTCAAGGAGTGTCCTCATCCTGATGAGAAGCAGCGGATGGAACTTAGTAAGAGGCTTGGCTTGGAGAATAAACAGATCAAGTTCTGGTTTCAAAATAGAAGAACTCAAATGAAGACTCAATTGGAACGCCATGAGAATATAATTCTGAGACAAGAGAATGAGAAACTCCGGGCTGAGAATAGTATGATAAAAGAAGCCATGGCCAACCCGATGTGTGACCGATGCGGTGGCCCCGCAATTCCCGGCCAAATTTTGTTTGAGGACCATCATCTTAGAATTGAAAATGCCCGGCTAAAGGATGAATTGAATCGAATATGTGCCTTGGCGAACAAGTTCCTGGGTAGGCCACTCTCATCCCTGGCCAGCTCCACAGTTGTTATGGGTTCGAATTCTGGCCTTGAACTCGCTATAGGAAGGAGCGAAATTGGTGCCTCAAGCACTCTAGGCTCTTCCTTGCCAATGGGGCTTGACTTAGGGGAAGGTATTTTGGGCACATCTTTGGCAATGCCCCGAATTAGATCGCCAATGGTAATGATGGGAGGCGAAATTCAGATTGATAGGTCTATGCTCATCGATCTCGCGCTGTCTGCTATGGAGGAATTGATGAAGATGGCTCAGGCAGATAGCCCTCTCTGGATTAAGTGTTTGGGTGGTGAGAGAGAGATACTGGACCATGAGGAGTATGAAAGGATAATTTCTCCTTGTATCGGCCCGAAACCGGCTGGTTTTATAACCGAAGCTACAAGAGAAACTGGGATAGTCATCATAAACAGTCTAGCCCTCATGGAGACATTAATGGATGCGAACCGGTGGGCGGAGATGTTTCCCTCGTTGATAGCTAGAGCTGCAACCGTTGATGTAATATCAAATGGTATGGGTGGAAGCAGAAATGGTGCTTTGCAAGTGATGCACGCTGAGGTTCAATTGCTTTCGCCGCTCGTCCCCGTGCGTCAATTGAGATTTCTCCGGTTTTGCAAGCAGCATACGGAAGGTGTGTGGGCTGTAGTTGATGTTTCGGTTGAGATTGGCCATAGTTCAATCAATGGCCACCCATACGTGAGCTGTAGGAGGCTTCCTTCGGGCTGTGTCGTGCAAGATATGCCCAATGGTTACTCCAAGGTTACATGGGTTGAACATACACAATACGATGAAAGCATTGTTCACCAGCTGTACCGGCCGTTGGTGAATTCCGGCTTCGGCTTTGGCGCTCATAGGTGGATTGCCACCCTTCAGAGGCAATGTGAATGCTTGGCAATCCTCATGTCCTCTTCTATACCCAGTGAGGACCATACAGCATTAAGCCAAGCTGGTAGGAGAAGCTTGTTGAAGCTGGCGCAGCGCATGACCAATAACTTCTGTTGCGGGGTTTGTTTATCGTCGGCGCGCAAGTGGGACGGCCTCCACATTGGCACGCTCGGCGATGACGTGAAGGTGATGACTAGGAAGAACCTGGATAACCCAGGGGAGCCTCCCGGGATCGTGCTGAGTGCGGCGACTTCTGTTTGGATCCCGGTGTCCCGGGAGAGCCTGTTCAATTTTCTCCGTGACGAACGGCTGAGGAGCGAGTGGGACATTTTGTCGAATGGGGGGCCGATGCAGGAGATGGTCCATATTGCCAAAGGTCAAGGTTCTGGAAATTGTGTTTCTCTCCTTCGTGCCAGCGCTGTGAATCCCAACGAAAGCAATATGGTAATTCTACAAGAGACATGGACGGACCCGTCGTGCTCGGTGGTAGTGTATGCTCCGGTCGACGTTCAATCCTTGAACGTGGTAATGAGCGGTGGAGACTCTGCCTATGTTGCCCTCTTGCCCTCAGGGTTCGCCATCCTCCCCGACGGCCACCACACCAGCTTTGGCAGCGGTCTACTCAAAGGCGGCAACAGCCCCGACGGAGGCGGTGACCGCCAGGGAAGCCTACTCACAGTGGGGTTCCAGATTCTGGTAAACAGCCTGCCGACGGCAAAACTCACGGTGGAGTCCGTCGAGACAGTGAACAACCTCATCGCCTGCACTATTCAGAAGATCAAAAGCGCACTGCCAGTTGCATGA 2271 0.5059 MEGHGDMGLIGEFDHSLMGRMRDDEYESRSGSDNFEGVSGDDQDAGGGGGDDQSKRRKKYHRHTPHQIQELEAFFKECPHPDEKQRMELSKRLGLENKQIKFWFQNRRTQMKTQLERHENIILRQENEKLRAENSMIKEAMANPMCDRCGGPAIPGQILFEDHHLRIENARLKDELNRICALANKFLGRPLSSLASSTVVMGSNSGLELAIGRSEIGASSTLGSSLPMGLDLGEGILGTSLAMPRIRSPMVMMGGEIQIDRSMLIDLALSAMEELMKMAQADSPLWIKCLGGEREILDHEEYERIISPCIGPKPAGFITEATRETGIVIINSLALMETLMDANRWAEMFPSLIARAATVDVISNGMGGSRNGALQVMHAEVQLLSPLVPVRQLRFLRFCKQHTEGVWAVVDVSVEIGHSSINGHPYVSCRRLPSGCVVQDMPNGYSKVTWVEHTQYDESIVHQLYRPLVNSGFGFGAHRWIATLQRQCECLAILMSSSIPSEDHTALSQAGRRSLLKLAQRMTNNFCCGVCLSSARKWDGLHIGTLGDDVKVMTRKNLDNPGEPPGIVLSAATSVWIPVSRESLFNFLRDERLRSEWDILSNGGPMQEMVHIAKGQGSGNCVSLLRASAVNPNESNMVILQETWTDPSCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGHHTSFGSGLLKGGNSPDGGGDRQGSLLTVGFQILVNSLPTAKLTVESVETVNNLIACTIQKIKSALPVA 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2718 756 ProSitePatterns 'Homeobox' domain signature. 89 112 IPR017970 GO:0000981|GO:0006355
Alju01g2718 756 MobiDBLite consensus disorder prediction 1 64 - -
Alju01g2718 756 Pfam Homeodomain 57 112 IPR001356 GO:0003677
Alju01g2718 756 SUPERFAMILY Homeodomain-like 40 114 IPR009057 -
Alju01g2718 756 CDD homeodomain 57 114 IPR001356 GO:0003677
Alju01g2718 756 SMART HOX_1 56 118 IPR001356 GO:0003677
Alju01g2718 756 Coils Coil 108 143 - -
Alju01g2718 756 Pfam START domain 267 490 IPR002913 GO:0008289
Alju01g2718 756 MobiDBLite consensus disorder prediction 16 31 - -
Alju01g2718 756 ProSiteProfiles START domain profile. 257 493 IPR002913 GO:0008289
Alju01g2718 756 FunFam Homeobox-leucine zipper protein GLABRA 2 266 489 - -
Alju01g2718 756 Gene3D - 49 130 - -
Alju01g2718 756 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 55 753 IPR042160 -
Alju01g2718 756 SMART START_1 266 490 IPR002913 GO:0008289
Alju01g2718 756 FunFam Homeobox-leucine zipper protein HDG1 42 130 - -
Alju01g2718 756 CDD START_ArGLABRA2_like 261 489 - -
Alju01g2718 756 Gene3D - 269 488 IPR023393 -
Alju01g2718 756 SUPERFAMILY Bet v1-like 537 750 - -
Alju01g2718 756 SUPERFAMILY Bet v1-like 259 490 - -
Alju01g2718 756 ProSiteProfiles 'Homeobox' domain profile. 54 114 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2718 Alju-ChrAlju01 28130265 28135543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2718 1 753 Homeobox Transcription Factor Family AT3G61150 59.420 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Alju01g2718 START 3.7e-50 CL0209