Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2714 ATGTTGGCAATTGGACTATTGAACCACCAACCCCCAAAACTACTCTGCGACTTTCTCAGGTTTTTAATGGATGGGAACGACAACGACTTGGGTAGTGCACATGAAGAAAATGTTGAAGTCAGACCTGAGACATCAAATAACTTGGACTTGAATGTGGAGCAGAACTGTTGCAGCCCCAAGGTTATACATGTTAATGGTTCTCAATCTGGTAATCCTTCCACAGACGAACCTACTACCAATAATGTATTAGGAGTTGGGACAGAATTTGAATCTGATGAGCATGCATATGGATTCTATAACAAATATGCCAAGTTGGTGGGTTTCAGTGTTAGAAAAGATTGGGTAAATAGGAGTAAAGTACATGGTCAAGTGGTGTCTAGGAAGTTTACTTGCTCCAAAGAGGGGTACCGCAGGAAAGACAAAAGAGATGTTAATGTGAAGAAACATAGGAAAGAAACAAGAACTGGTTGCTTGGCTCATATGATCATCACTCGCCAACCAGATGGTAAGTATCGAGTTACCCATTTTGAACCACAGCACAATCATGATAATATAAATCCTAGTAATGCTCACATGTTATTGCTGCAAAATGAACTAAGTGCTGCTCAAGGGGTAGAAGACCCTAAAAATACTGTGGGAACACCAAAGTCAAAGTTGGCATTTCAAGTGATGAATAGAAAATTTGCAGCTCGTGTGTCTCTTGATCAAGTTTCTATGGATTATGACAATCACCTTCAGTCAGAGAGGGATAGAGATATGAATGAAGGAGAAGCAGGACGTTTATTGGGTTACTTTCAAAGACAGCACTTCGAAAATCCCACATTGTTTTATTCCATACAGTTAGATGTTGATGACAAGAACAAAAAGAGAACTTCGACCATTTCTAGGGCCTCTGAATCTGAGGAAGCATATCAATTTGCTCAGATAAAACTCGATGAGATAATAGAAGGAGTTGAGAAAATCTTGACGTTGAAAGATGCAGAAACTCAAATTATAACCTCCAGTAGCGCTGATGTAAATGCTCCTGAGAATGAGCCTGCAGACATCTTTCTCAATGGACAGGCAATGGAAGATCAAAATGAAAGTAACAGAATGGATGAGGAAAAAGAAGGGAGCTCTACTCCTGTTAGGACCCATCAAACTACTATGCATTGTGACGGATTAGATACTGAAAGGGTCCTAGATGTGGAAGTTTCGCCGCCAGATAATGTTGCCTGCATTTCAAGTCCCTCTTCTGCATATGTTTCATCTCAATGTACAACACCAAATCCCATTATGCAGGAACTGTATAATTTTGAAGCTAACCATGTGGTCCAGTGCATGTATGAACAGTCTAATCTTGCGCTGGACTCCCAATCTAATGATAACATGTACCATCCACAAAACTTCTTTTCTAACCAACAGGATTCTCCTGGCCAACCTCAACTAATACAGGAGCCTGTAATCCAAAGCGCATACCAGCCGTCCATCCGTAGCAATAATCAAATGAGGCAGGTAATGGATATCCAAAATCCGCATTCGTCTTCATTCTTGCTGTATGATCATAGATACAGAACTTCAGACGCTGCATAA 1572 0.4052 MLAIGLLNHQPPKLLCDFLRFLMDGNDNDLGSAHEENVEVRPETSNNLDLNVEQNCCSPKVIHVNGSQSGNPSTDEPTTNNVLGVGTEFESDEHAYGFYNKYAKLVGFSVRKDWVNRSKVHGQVVSRKFTCSKEGYRRKDKRDVNVKKHRKETRTGCLAHMIITRQPDGKYRVTHFEPQHNHDNINPSNAHMLLLQNELSAAQGVEDPKNTVGTPKSKLAFQVMNRKFAARVSLDQVSMDYDNHLQSERDRDMNEGEAGRLLGYFQRQHFENPTLFYSIQLDVDDKNKKRTSTISRASESEEAYQFAQIKLDEIIEGVEKILTLKDAETQIITSSSADVNAPENEPADIFLNGQAMEDQNESNRMDEEKEGSSTPVRTHQTTMHCDGLDTERVLDVEVSPPDNVACISSPSSAYVSSQCTTPNPIMQELYNFEANHVVQCMYEQSNLALDSQSNDNMYHPQNFFSNQQDSPGQPQLIQEPVIQSAYQPSIRSNNQMRQVMDIQNPHSSSFLLYDHRYRTSDAA 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2714 523 Pfam FAR1 DNA-binding domain 98 183 IPR004330 -
Alju01g2714 523 MobiDBLite consensus disorder prediction 358 380 - -
Alju01g2714 523 MobiDBLite consensus disorder prediction 360 374 - -
Alju01g2714 523 MobiDBLite consensus disorder prediction 454 474 - -
Alju01g2714 523 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 53 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2714 Alju-ChrAlju01 27925341 27928850 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Alju01g2714 FAR1 5.8e-26 CL0274