Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2713 ATGGGATTTTTCCGGCGACTCTTCGGTGCCAAAAAATCGGATCATTCCTCCGGTAAGGACAAGAAGAAATGGTCCTTCGGCAAAACCAAGGACAAGTCTCACGGTTCTAAAACTAAAGGATCTGATCTCAACAACTTCGATTCCTCCACAACATTCTCCGACTCTTTAGACGCCAATAAGCATGCCATTGCCGTAGCGGCGGCCACGGCCGCTGTGGCGGAGGCCGCACTAGCCGCTGCTCACGCGGCCGCTGAGGTAGTCCGACTAACCAGTGGCCCCTCCGTCACTCGACCGCCGAGTACTTGTACGACACTGGCCAGCACTAGCCAACGCCTGTGGGTGGAGGAAGCGGCCGCCGTTAAAATACAGTCCGCTTTCCGGTCTTATCTGGCAAGGAGAGCACTACGAGCGCTCAAAGCATTGGTGAAGCTGCAAGCACTGGTGAGAGGCCACATAGTAAGAAAGCAAACTGCAGACATGCTCCGGCGCATGCAAACATTGGTCAGACTTCAGGCTCGGGCACGTGCGAACCGTGCGCACATGTCAGATCATCATCTTTATTCTAGCAAGTCTTCAATGTTTTATCACCCTGTCCCTGAAGATGATGAGCGTCCACTTCGTGCCTATAGTTCTAAATTTGATGGATCTTCCATCCTCAAGCGATGTAGCTCCAATGCAAATTTTAGGGAGATTGGTCCACAAAGAGCACAGTTTGGATCACATTGGTTGGATCGTTGGATGGAAGAAAGTGTTTGGAACCACCCAAGAGACGTTTCACTGAGAAATATGCGCGCCGATGATGAGAAGAGCGCCAAGATCCTTGAAGTGGACACATGGAAGCCACACTTCAGGTCTCACCGAAGCAGCAGCTCCTTCCACCATGCATCTCAATACTACTTAACCTCCGACTACGTCAGCAGCGAGATGGCTTATGACTCTCCATCCAAAAGCTCAGCGAAAGCTCTAAACCAAAGCCTCTCATCACTGAGCTCCTTGAAAATTCAGAAGGGAAAAGAAGCAGTAGTATCAGCTTCATCAAGAACAGCTGAGAATAGCCCACAAGTACTTTCAGCTTCATCATGTAGACATGGAAATGGAGGAGGTAGAAGAGGCCCTTTCACACCCACAAGGAGTGAGTGTTCTTGGGGTTTCTTTGGGTATCCAAATTACATGGCCAACACTGAATCATCAAGGGCTAAGGTTAGATCTCAGAGTGCTCCTAAGCAAAGGTTGGAGTTTGACAGCTATAGTTCAAGTGGGAGAAGTGTTCAAGGATTATGGGATTATTCAGATAGGGATGGAGATTTCAGAAACAGAGCATATCCAGCTTCAACCCGTTTGAACAGAGTTGGGAGTACCAATTTAAGGTGA 1371 0.4909 MGFFRRLFGAKKSDHSSGKDKKKWSFGKTKDKSHGSKTKGSDLNNFDSSTTFSDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGPSVTRPPSTCTTLASTSQRLWVEEAAAVKIQSAFRSYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQARARANRAHMSDHHLYSSKSSMFYHPVPEDDERPLRAYSSKFDGSSILKRCSSNANFREIGPQRAQFGSHWLDRWMEESVWNHPRDVSLRNMRADDEKSAKILEVDTWKPHFRSHRSSSSFHHASQYYLTSDYVSSEMAYDSPSKSSAKALNQSLSSLSSLKIQKGKEAVVSASSRTAENSPQVLSASSCRHGNGGGRRGPFTPTRSECSWGFFGYPNYMANTESSRAKVRSQSAPKQRLEFDSYSSSGRSVQGLWDYSDRDGDFRNRAYPASTRLNRVGSTNLR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2713 456 MobiDBLite consensus disorder prediction 344 361 - -
Alju01g2713 456 MobiDBLite consensus disorder prediction 344 373 - -
Alju01g2713 456 MobiDBLite consensus disorder prediction 400 422 - -
Alju01g2713 456 MobiDBLite consensus disorder prediction 8 38 - -
Alju01g2713 456 MobiDBLite consensus disorder prediction 1 44 - -
Alju01g2713 456 Pfam IQ calmodulin-binding motif 139 156 IPR000048 GO:0005515
Alju01g2713 456 Pfam IQ calmodulin-binding motif 117 136 IPR000048 GO:0005515
Alju01g2713 456 PANTHER IQ-DOMAIN 5-RELATED 3 421 - -
Alju01g2713 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 160 IPR027417 -
Alju01g2713 456 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Alju01g2713 456 SMART iq_5 137 158 IPR000048 GO:0005515
Alju01g2713 456 SMART iq_5 114 136 IPR000048 GO:0005515
Alju01g2713 456 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Alju01g2713 456 Gene3D - 114 166 - -
Alju01g2713 456 Pfam Protein of unknown function (DUF4005) 349 414 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2713 Alju-ChrAlju01 27896992 27901218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2713 1 429 IQD Protein Family AT5G62070 46.953 3.36e-63 208