Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2699 ATGGGCTCTTCAATTCTCTACTCTCCTTCTCGCACTCGCTTCTACTCTCTCACGCCAACACTTTCTCTCTCTTCTGTCTCTCCCGTTCGTCTCCAACGACCCCATTTTCCCTCTTCTTCCCTCTCCCTGCGAAGCAGAACTCTGTCGAAGACAATTACAACCCCATTTGCCTATGTGACTGGACCCGCATCCGACCCGATTTTCAGTGAATGCGACCCTAAGATAGATGGGTCTGATCCCCGGCCGGAGAAAGTCCGGCCGCCCACCGTCATTAGCTGGGGCCTTCTCTGGATGCTTTTAATGAAACACAAATTTCGGCTTGTGGTTTCACTTGTGACTCTAATTTGTTGCACCACTTGTACTCTTTCTATGCCCCTATTTTCTGGTCAATTTTTTGAGGTTCTAATTGGGGCAAGACCAGAACCATTATGGAGGCTGCTTAGTAAGGTTGGAATGCTGTATGCCCTTGAGCCAGTTTTAACTATTACTTTTGTTACAAACATGAACATAATGTGGGAGAAGATTATGTCAACACTAAGAGCTCAGATCTTTGGAAGGATATTGATGCAAAAGGTGGAATTTTTTGACAGATACAAGGTTGGTGAACTCACTGGTTTGCTAACATCGGATTTGGGTTCCCTTAAAGATATTGTGAGTGAAAATGTTGCAAGGGATCGTGGATTCAGGGCATTATCTGAGGCAAGCATTTCTACACCAATCAGAAGTAATCTCTTTTATTGTCATTACTACTTTACACTTGCTTGTGTCATTGGAACAATATGCATACTTTTTGCTTTGTCGCCTCAACTTGCTCCAATTTTGGGGATCCTAATACTCACAGTTTCTGTTTCAGTTGCTATCTACAAGAGATCAACTCTGCCGGTTTTTAAAGCATATGGGTTGGTCCAAGCATCCATAGCTGATTGTGTAGCAGAAACGTTTTCTGCTATCCGTACAGTAAGATCCTTTGGTGGAGAGAAACGCCAAATGTTTACATTTGCTAACCAGGTTCTTTCTTACCAATCCAGCGGGATAAAGCTTGCCACTTTTAAATCTCTAAATGAGTCCATGACTAGAGTTGCTGTTTATGTTTCTTTGCTGTCATTATATATCCTTGGAGGAAACAAAGTTAAAGCGGGTGAACTCTCTGTTGGAATTGTGGCGTCTTTTATTGGTTACACTTTCACATTAACTTTTGCTGTTCAAGGAATGGTTAATACTTTTGGAGATCTACGTGGAGCTATTGCTGCTGTTGAGAGGATCAACAATGTTTTCTCTGAGGTTCAAATTGACGAAGCCCTTGCTTATGGCTTAGAAAGAGAACTGAAACAGAAAGAACTAAATGATGATAACTATAAACTGTTCTTCTCTGACAACTATACTGGGAAAAAAGAACAAAAATACTTGCATTACATGTCAGCATTGAAATCATCAAGCAATTTGTACAGCTTAGCTTGGTCTGGAGATGTTTGTCTTCAAGATGTATATTTCTCTTATCCTTTAAGGCCAGATGTGGAAATCTTAAGTGGCTTAAATTTAACACTAAAATATGGAACTATAACTGCATTGGTGGGTCCTAGTGGTGCAGGAAAAAGTACAATAGTACAGCTTTTGGCTCGGTTTTATGAGCCAACAAGAGGTCATATAACAGTTGCCGGAGAGGATGTTCGAACATTTGACAAGAGTGAATGGGCTCGGGCTATCTCTATTGTAAATCAAGAGCCTGTTCTGTTTTCGGTGTCTGTTGGAGAAAATATTGCATATGGGCTTCCAGATGATGATGTTTCTAAAGAAGATGTGATCAAGGCAGCAAAAGCTGCAAATGCTCACGACTTCATACTTTCACTTCCGCAGGGCTATGATACACATGTCGGTGAGCGTGGAGGCCTATTAAGTGGGGGACAGAGGCAGAGAATTGCTATTGCACGAGCACTCTTAAAGAATGCCCCGATCCTTATACTTGATGAGGCCACCAGTGCCTTAGATGCAGTAAGTGAGAGGTTGGTCCAGGACGCTCTTAACCATTTGATGAAGGGGAGGACAACATTAGTGATAGCTCACCGATTGAGCACAGTTCAAAATGCCCATCAAATTGCACTCTGCTCTGATGGCAAAATTGCAGAACTAGGAACACACCATGAGTTGCTGGCTGAGAAGGGCCAATATGCTTCACTGGTTGGTGCTCAAAGGCTTGCATTTGAATGA 2205 0.4231 MGSSILYSPSRTRFYSLTPTLSLSSVSPVRLQRPHFPSSSLSLRSRTLSKTITTPFAYVTGPASDPIFSECDPKIDGSDPRPEKVRPPTVISWGLLWMLLMKHKFRLVVSLVTLICCTTCTLSMPLFSGQFFEVLIGARPEPLWRLLSKVGMLYALEPVLTITFVTNMNIMWEKIMSTLRAQIFGRILMQKVEFFDRYKVGELTGLLTSDLGSLKDIVSENVARDRGFRALSEASISTPIRSNLFYCHYYFTLACVIGTICILFALSPQLAPILGILILTVSVSVAIYKRSTLPVFKAYGLVQASIADCVAETFSAIRTVRSFGGEKRQMFTFANQVLSYQSSGIKLATFKSLNESMTRVAVYVSLLSLYILGGNKVKAGELSVGIVASFIGYTFTLTFAVQGMVNTFGDLRGAIAAVERINNVFSEVQIDEALAYGLERELKQKELNDDNYKLFFSDNYTGKKEQKYLHYMSALKSSSNLYSLAWSGDVCLQDVYFSYPLRPDVEILSGLNLTLKYGTITALVGPSGAGKSTIVQLLARFYEPTRGHITVAGEDVRTFDKSEWARAISIVNQEPVLFSVSVGENIAYGLPDDDVSKEDVIKAAKAANAHDFILSLPQGYDTHVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAHQIALCSDGKIAELGTHHELLAEKGQYASLVGAQRLAFE 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2699 734 ProSitePatterns ABC transporters family signature. 631 645 IPR017871 GO:0005524|GO:0016887
Alju01g2699 734 SUPERFAMILY ABC transporter transmembrane region 252 426 IPR036640 GO:0005524|GO:0016020
Alju01g2699 734 Gene3D - 488 731 IPR027417 -
Alju01g2699 734 SMART AAA_5 517 711 IPR003593 GO:0016887
Alju01g2699 734 SUPERFAMILY ABC transporter transmembrane region 96 221 IPR036640 GO:0005524|GO:0016020
Alju01g2699 734 CDD ABC_MTABC3_MDL1_MDL2 492 729 - -
Alju01g2699 734 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 490 728 IPR003439 GO:0005524
Alju01g2699 734 FunFam ATP-binding cassette sub-family B member 8, mitochondrial 488 732 - -
Alju01g2699 734 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 83 732 IPR039421 -
Alju01g2699 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 481 729 IPR027417 -
Alju01g2699 734 Gene3D ABC transporter type 1, transmembrane domain 92 432 IPR036640 GO:0005524|GO:0016020
Alju01g2699 734 Pfam ABC transporter transmembrane region 252 400 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g2699 734 Pfam ABC transporter transmembrane region 108 222 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g2699 734 CDD ABC_6TM_TAP_ABCB8_10_like 111 421 - -
Alju01g2699 734 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 108 413 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g2699 734 Pfam ABC transporter 508 659 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2699 Alju-ChrAlju01 27465192 27471225 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2699 487 734 Calmodulin-binding Proteins AT2G36910 54.183 3.49e-75 263