Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2693 ATGCATCTGAATCAGATTCGATTCTCAAGCCTCCTTTTACTATTTGCAATTTGCTTTTCTGAGTTAGCTAGAGCAATGGGTAAAGGTGGCATGTCCCGTGAAGGTCATGGAGAAGAAGAGAATATGGCTGCTTGGCTTGTTGGTATAAATACCCTCAAGATTCAACCTTTCAAGCTTCCTACTCTGGGACCCCATGATGTCAGAATTAGAATGAAAGCTGTTGGTATCTGTGGCAGTGATGTTCACTACCTCAAGACACTGAGATGTGCAGATTTTATAGTGAAAGAACCAATGGTAATTGGTCATGAGTGTGCAGGGATCCTAGAGGAGATTGGTAGTGAGGTAAAGCATTTGGTACCTGGAGACCGTGTAGCAGTTGAACCTGGGATTAGTTGTTGGCGTTGTGATCTCTGTAAAGACGGTCGGTACAATTTATGCCCTGATATGGAGTTCTTTGCAACTCCACCAGTTCATGGTTCCCTTGCTAATCAGATAGTGCATCCTGCGGACCTATGTTTCAAATTACCAGATAATGTGAGCTTGGAGGAGGGGGCAATGTGCGAACCCCTGAGTGTTGGTGTTCATGCTTGTCGCCGAGCTAGTGTTGGGCCAGAAACAAATGTGATGATCATGGGAGCAGGTCCCATTGGACTTGTCACAATGCTTTCAGCTCGAGCTTTTGGGGCACCGAAGATCATCATTGTGGATGTGGATGACCATCGTTTGTCTGTTGCAAAAAATCTTGGGGCAGATGAGACCGTTAAGGTTTCAACAAAGATTGAGGATGTGAGTGAAGAAGTTGTTCAGATACATAAAGCTATGGGAGGTAGGGTGGATATTACCTTTGATTGCGCAGGTTTCAACAAAACTATGACCACTGCATTGAATGCTACTCGAGCGGGCGGCAAAGTGTGCCTTGTGGGAATGGGTCATAGTGAAATGACTGTTCCACTCACGCCTGCTGCTGCAAGGGAAGTTGATGTGATTGGGATATTCCGTTACAAGAACACATGGCCTCTGTGTTTGGAGTTTCTGAGGAGTGGGAAGATAGATGTGAAACCCCTTATCACTCACAGGTTTGGATTCTCTCAGAAGGAGGTTGAAGAAGCCTTTGAAACCAGTGCTCGTGGAGGCAATGCTATTAAGGTCATGTTCAATCTGTAA 1164 0.4536 MHLNQIRFSSLLLLFAICFSELARAMGKGGMSREGHGEEENMAAWLVGINTLKIQPFKLPTLGPHDVRIRMKAVGICGSDVHYLKTLRCADFIVKEPMVIGHECAGILEEIGSEVKHLVPGDRVAVEPGISCWRCDLCKDGRYNLCPDMEFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRASVGPETNVMIMGAGPIGLVTMLSARAFGAPKIIIVDVDDHRLSVAKNLGADETVKVSTKIEDVSEEVVQIHKAMGGRVDITFDCAGFNKTMTTALNATRAGGKVCLVGMGHSEMTVPLTPAAAREVDVIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2693 387 Gene3D - 192 332 - -
Alju01g2693 387 SMART PKS_ER_names_mod 48 385 IPR020843 GO:0016491
Alju01g2693 387 CDD sorbitol_DH 43 386 IPR045306 GO:0016616
Alju01g2693 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 101 115 IPR002328 GO:0008270|GO:0016491
Alju01g2693 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 178 351 IPR036291 -
Alju01g2693 387 Pfam Zinc-binding dehydrogenase 215 345 IPR013149 -
Alju01g2693 387 SUPERFAMILY GroES-like 41 213 IPR011032 -
Alju01g2693 387 PANTHER SORBITOL DEHYDROGENASE 40 387 - -
Alju01g2693 387 Gene3D - 51 374 - -
Alju01g2693 387 FunFam Sorbitol dehydrogenase 192 332 - -
Alju01g2693 387 Pfam Alcohol dehydrogenase GroES-like domain 64 175 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2693 Alju-ChrAlju01 27390834 27396975 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2693 54 320 Monolignol Biosynthesis Gene Families AT4G37980 27.698 5.64e-19 84.7