Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2653 ATGCCCTCGAATTGTTTCTGTTGTTTCCTCCCACAAGAAGAACACCAGCAAGCCAAAACAAGAAGTGACGGCAAAAATAGGGACTATCCATGGGAAATGTACACGTTGAAGGAGTTGCTTCGTGCAACAAACAATTTCCATCAAGATAACAAGATAGGAGAGGGTGGTTTTGGAAGTGTTTATTGGGGTCGAACAATGAAGAGACTGAAAACGATGACGGCGAAGGCAGAGATGGAATTTGCAGTGGAAGTAGAAGTACTTGGAAGGGTGAGGCATAAGAACTTGTTAGGTCTAAGAGGATTCTACGCTGGAGGAGAAGAAAGACTCATTGTTTACGATTACATGCCCAATCATAGCTTGCTCACACATCTTCATGGCCAGCTCTCTTCTAGATGTCAGCTAGATTGGCCTAAAAGAATGAGCATCGCCATCGGAGCAGCCGAAGGCTTGGCGTATCTGCACCATGAGGCGAATCCTCACATTATACATAGAGACATAAAGGCAAGCAATGTTCTTTTGGACACTGAGTTTCAAGCCAAAGTGGCTGATTTTGGGTTTGCAAAGCTAATACCAGAAGGTGTGAGCCATCTGACCACAAGAGTCAAAGGAACTTTGGGATATCTGGCGCCAGAATACGCCATGTGGGGTAAAGTTGCAGAGAGCTGTGATGTGTATAGCTTTGGGATTTTGCTTTTGGAGATCGTAAGCGCGAAGAAGCCGATAGAGAAGCTTCCGGGAGGAGTGAAAAGGGACATAGTTCAGTGGGTGACACCTTATGTTCAAAAGGGTATCTTCAATCATATTGCAGATCCAAAGTTGAAGGGAAAATTTGACATGGAGCAGTTGAAATCTGTGATGATGCTGGCTATGAAGTGCACCGATAGCAGCCCGGAGAAGCGACCAAGTATGGCGGAGGTCGTGGAGTGGCTCAAGCGCGGCGGCGGCGTTGAGAGGAGGAGGAAGGAGATTCCGGCAGCTCTGAGGGGCAAGCATGGAGATGAAGAAAACGACAAGAATGATAAGGACTATGAAGACATGGGAAAGAGGCAATCCTTGATGAGGATACCAAGCGATAGATATAAAATAAGATGA 1092 0.4615 MPSNCFCCFLPQEEHQQAKTRSDGKNRDYPWEMYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTMKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGQLSSRCQLDWPKRMSIAIGAAEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVAESCDVYSFGILLLEIVSAKKPIEKLPGGVKRDIVQWVTPYVQKGIFNHIADPKLKGKFDMEQLKSVMMLAMKCTDSSPEKRPSMAEVVEWLKRGGGVERRRKEIPAALRGKHGDEENDKNDKDYEDMGKRQSLMRIPSDRYKIR 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2653 363 Gene3D Phosphorylase Kinase; domain 1 11 114 - -
Alju01g2653 363 MobiDBLite consensus disorder prediction 320 363 - -
Alju01g2653 363 FunFam PTI1-like tyrosine-protein kinase At3g15890 17 114 - -
Alju01g2653 363 FunFam PTI1-like tyrosine-protein kinase At3g15890 115 324 - -
Alju01g2653 363 PANTHER OS01G0253100 PROTEIN 21 313 - -
Alju01g2653 363 Gene3D Transferase(Phosphotransferase) domain 1 115 322 - -
Alju01g2653 363 ProSiteProfiles Protein kinase domain profile. 46 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2653 363 Pfam Protein kinase domain 46 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2653 363 SUPERFAMILY Protein kinase-like (PK-like) 27 312 IPR011009 -
Alju01g2653 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Alju01g2653 363 SMART serkin_6 46 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2653 Alju-ChrAlju01 26028369 26030146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2653 15 311 Receptor kinase-like Gene Family AT5G45780 42.581 1.90e-77 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Alju01g2653 Pkinase 7.5e-41 CL0016