Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2652 ATGTTTCCTTTACAACGAGGCAATGAGCTGGTGATCCAATTTTCCAGGAGTCCCAATACTCAGAACCAAGAAAGCAAGATCTCATCAGAAGATCCGATTCTGAAGGATGATTATGATTCTCCTCGAGTCAGCAATTCTGATAATAAAAGAATAATTGGCAACACCTCAACAGGGAACAACATACTCTCTCGAGCTGCTAGTAGCAGTGATATTAATAATCCAAACGAAAACAAGAAGAAGAAGATGATTCACAGAGAGATTGAGAGGCAAAGGAGGCAAGAAATGGCTTCCCTTTATGCTTCCCTCAGATCCCTTCTTCCTCTTGAGTACATCAAGGGAAAGAGATCGATATCAGATCATATGAATGAGGCAGTGACTTATATAAAGCATTTACAGAAGAATATTAAAGAACTTGGTGCTAAGAGAGATTTACTGAAGAAGCACTCAGATAATTATTCTAACTTGGAAACCCCTGATGATGATGGGAGCAAACAGAAATCGATAAACTTTACTGTCCATGAGAATAATGGTGTTGTGGGAATTGAAATTATCAATAACTTCAAAGATGAAAGGTTCTTACTATCAAAGTTTCTGGAATTGCTGCTTGAAGAAGGACTTGAAGTTGTTACTTGTCTCTCTACCGAAGTCAATGGTAGAATACTTCATAGTATCAACTGTCAGGTTAACAGTTCCAGTAGTGTAGATCTAACTGAGCTGAGAAGGAAAATTGCAAGTTTCAGTTCTTAG 747 0.3802 MFPLQRGNELVIQFSRSPNTQNQESKISSEDPILKDDYDSPRVSNSDNKRIIGNTSTGNNILSRAASSSDINNPNENKKKKMIHREIERQRRQEMASLYASLRSLLPLEYIKGKRSISDHMNEAVTYIKHLQKNIKELGAKRDLLKKHSDNYSNLETPDDDGSKQKSINFTVHENNGVVGIEIINNFKDERFLLSKFLELLLEEGLEVVTCLSTEVNGRILHSINCQVNSSSSVDLTELRRKIASFSS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2652 248 MobiDBLite consensus disorder prediction 13 76 - -
Alju01g2652 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 78 149 IPR036638 GO:0046983
Alju01g2652 248 Coils Coil 128 148 - -
Alju01g2652 248 CDD bHLH_AtORG2_like 82 147 - -
Alju01g2652 248 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 67 245 - -
Alju01g2652 248 FunFam Transcription factor bHLH126 71 158 - -
Alju01g2652 248 MobiDBLite consensus disorder prediction 45 73 - -
Alju01g2652 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 79 131 IPR011598 GO:0046983
Alju01g2652 248 MobiDBLite consensus disorder prediction 29 44 - -
Alju01g2652 248 Gene3D - 71 157 IPR036638 GO:0046983
Alju01g2652 248 MobiDBLite consensus disorder prediction 13 28 - -
Alju01g2652 248 SMART finulus 85 137 IPR011598 GO:0046983
Alju01g2652 248 Pfam Helix-loop-helix DNA-binding domain 80 132 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2652 Alju-ChrAlju01 25994509 25995806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2652 84 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 46.386 4.59e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju01g2652 HLH 4.4e-11 No_clan