Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2634 ATGGAGGATCCTGCGCGGGTGTTGTTTCGTACCCGCAAGCAGGGGAGGGAGGTTAAGCTGTTTTTAGCTATGGCGCTGTTTTTGTATCTCTGTTCGTTTGCTTCATCTCTCAACGACGAAGGACAAACATTAATGGCTATCAAGGCTTCTTTCAGCAATGCAGCGAATGATTTGCTTGATTGGGATGGTGTACCAAATGACGACTTTTGTTCTTGGCGCGGAGTATACTGTGATCAGACCAGCGATACTGTGCTTACTCTGAATCTGTCAAGTTTAAACTTGGGCGGCGAAATATCACCAGCCATCGGTGAATTAAGAAACTTGCAATCCATAGATCTCCAGGGGAATAAACTAAGGGGTCAAATTCCAGATGAAATTGGGAACTGTGTCTCACTTATCCACCTTTGTCTAATGCCATGGTACTGTGATGGCATGTTCCTTTTCACGAAATGCAGAGATTTGTCTGATAACCAGTTATATGGGGACGTGCCTTTCTCCCTATCAAAGCTAAAGCAGCTAGAGTTTCTGCATTTGAAGAATAATCAGTTGACTGGTCCTATTCCATCAACATTATCCCAAATTCCTAACTTGAAAACGCTTGATCTTGCTCGAAACCGGCTCTCTGGTGAGATACCAAGATTGCTCTATTGGAATGAGGTCTTACAGTATCTAGGTTTGCGAGGAAACAATCTGACTGGAACTCTGTCCCCTGACATTTGTCAATTAACTGGTTTGTGGTATTTTGATGTGAGAGGCAATAATTTAATAGGCACAATACCTGAAAGCATTGGTAACTGTACAAGTTTTGAGATTTTGGATTTATCATATAATCAGATCAGTGGGGAAATTCCTTACAACATTGGATTTCTGCAAGTTGCAACTTTGTCTCTTCAAGGTAATAGGCTGACTGGGAAGATTCCAGAGGTGATTGGTCTGATGCAAGCTCTTGCTATTCTGGATTTGAGTGAGAATGAGCTGGTGGGACCTATCCCTCCAATGCTTGGCAATTTATCTTTTACCGGAAAGCTGTACCTCCATGGAAACTTGCTTTCTAGTCCTATTCCGCCAGAGCTTGGCAATATGTCTAAATTAAGTTATTTGCAGTTGAATGACAACCAATTAGTTGGCGAAATTCCTGAAGAACTTGGAAGGCTTGAACATTTGTTTGAATTGAATCTTGCCAACAATCATCTTGAGGGATCAATTCCACATAACATCAGCTCATGCTCAGCCTTGAATCAGTTCAATGTGCATGGTAATCACTTGAGTGGATCCATTCCTCTGAGTTTTAGAACCCTTGAGAGTTTGACTTACCTAAATCTTTCTGCTAACAACTTCAAAGGGAGAATACCAGTTGAACTGGGCCATATCATAAATCTTGATACACTGGATCTGTCAAGCAATAACTTTTCAGGTCCAGTTCCTTCATCTGTTGGTGACTTGGAGCATCTCTTGACCTTGAACCTGAGCCATAACCTTCTTGATGGTCCGTTGCCCACTGAATTTGGGAATTTGAGAAGCATACAGATTATTGATATTTCATACAACAGTCTTTCGGGCAGTATCCCTGTGGAAATTGGTCAACTGCAGAACCTTGCATCTCTGATACTGAACGACAATGGTTTGCATGGGAGAATTCCAGATCAGCTAGCTAATTGCCTGAGTCTCTCCTCCTTAAATGTTTCATACAATAATTTATCTGGAACTATTCCTCCTATGAGGAATTTTTCACGGTTTTCAGCTGACAGTTTCATTGGAAATCCGTTATTATGTGGGAAAAAGTTGGGATCAGTTTGTGGTCCTTACATATCAAAATCCAGAGTGTTTTTTTCAACGGCTGCAGTCCTTTGTCTCGCGCTGGGTATCATCGCAATATTGGTGGTGGCCATTATTGCTATTTATGGATCCAGCCAGTCAAAGCAACTCATGAAAGGATTGAGCAGATCTGGAGAAGGTCCCCCCAAACTTGTAATTCTTCATATGGATATGGCAATTCATACCTTGAATGATATATTGAGAGCTACTGAGAATCTCAGCGAGAAATATATCATTGGGTATGGCGCCACTAGTACAGTGTACAAGTGTAATTTAGAAGGTTCTCGGCCAATCGCAATTAAGCGGCTTTACAACCAGCATCCACACAATTTGCAAGAATTTGAAACAGAACTTGAGACTGTTGGCAGCATCAGACATAGAAACCTTGTCACTTTGCATGGTTATGCACTGACCCCCAATGGAAATCTCCTATTCTATGACTACATGGAGAATGGCTCTTTGTGGGATCTTCTTCATGGTTCCTTGAAGAAGGTAAAACTTGACTGGGAAACACGATTAAGGGTTGCTGTTGGTGCTGCTGAAGGACTTACTTATCTTCATCATGATTGCAACCCTCGGATTATTCATAGGGATATTAAATCCTCAAATATTTTGCTGGATGAGAACTTTGAGCCTCATATTTCTGATTTTGGTATTGCAAAAAGCATATCAACAACAAGAACTCATGCGTCAACTTTTGTTCTTGGAACCATTGGGTATATTGATCCTGAGTATGCCCAGACTTCTCGGTTGAATGAAAAATCAGATGTCTACAGCTTTGGCATTGTTCTACTAGAGCTACTAACTGGGAAGAAAGCAGTAGATAATGAGTCTAACTTGCTACAATTGATATTGTCCAAGACAGATAACAACACAGTAATGGAAGCGGTGGATCCAGAGGTGTGTGTGACCTGCTTGGATCTAGCCCGTGTGAAGAAGACCTTTCAGCTTGCTCTGCTATGCACAAAAAGAAACCCTTCTGAGAGGCCTACCATGCATGAGGTTGCAAGGGTATTGGCGTCGCTACTTCCTACCACGCCTAACAAGGTGTCCACTTCCCCGGCAAAGATGTCTGATTTTGCACAATTTTTGATAGATCAGGGACGATGTCAAAGGTTAGAGTTGGTGCAACCGAAGCAGGAGAATAATAACTCTTCTGATGCTCATTGGTTCGTTACCTTCGGAGATGTATCCAAAGACCCCCTAAGTCCGAATCACATCATCTGA 3042 0.4195 MEDPARVLFRTRKQGREVKLFLAMALFLYLCSFASSLNDEGQTLMAIKASFSNAANDLLDWDGVPNDDFCSWRGVYCDQTSDTVLTLNLSSLNLGGEISPAIGELRNLQSIDLQGNKLRGQIPDEIGNCVSLIHLCLMPWYCDGMFLFTKCRDLSDNQLYGDVPFSLSKLKQLEFLHLKNNQLTGPIPSTLSQIPNLKTLDLARNRLSGEIPRLLYWNEVLQYLGLRGNNLTGTLSPDICQLTGLWYFDVRGNNLIGTIPESIGNCTSFEILDLSYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGPIPPMLGNLSFTGKLYLHGNLLSSPIPPELGNMSKLSYLQLNDNQLVGEIPEELGRLEHLFELNLANNHLEGSIPHNISSCSALNQFNVHGNHLSGSIPLSFRTLESLTYLNLSANNFKGRIPVELGHIINLDTLDLSSNNFSGPVPSSVGDLEHLLTLNLSHNLLDGPLPTEFGNLRSIQIIDISYNSLSGSIPVEIGQLQNLASLILNDNGLHGRIPDQLANCLSLSSLNVSYNNLSGTIPPMRNFSRFSADSFIGNPLLCGKKLGSVCGPYISKSRVFFSTAAVLCLALGIIAILVVAIIAIYGSSQSKQLMKGLSRSGEGPPKLVILHMDMAIHTLNDILRATENLSEKYIIGYGATSTVYKCNLEGSRPIAIKRLYNQHPHNLQEFETELETVGSIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGSLKKVKLDWETRLRVAVGAAEGLTYLHHDCNPRIIHRDIKSSNILLDENFEPHISDFGIAKSISTTRTHASTFVLGTIGYIDPEYAQTSRLNEKSDVYSFGIVLLELLTGKKAVDNESNLLQLILSKTDNNTVMEAVDPEVCVTCLDLARVKKTFQLALLCTKRNPSERPTMHEVARVLASLLPTTPNKVSTSPAKMSDFAQFLIDQGRCQRLELVQPKQENNNSSDAHWFVTFGDVSKDPLSPNHII 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2634 1013 Pfam Protein kinase domain 681 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2634 1013 Pfam Leucine rich repeat 459 518 IPR001611 GO:0005515
Alju01g2634 1013 Gene3D Ribonuclease Inhibitor 220 292 IPR032675 -
Alju01g2634 1013 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 649 753 - -
Alju01g2634 1013 Pfam Leucine Rich repeats (2 copies) 171 209 IPR025875 -
Alju01g2634 1013 Pfam Leucine rich repeat N-terminal domain 38 78 IPR013210 -
Alju01g2634 1013 ProSiteProfiles Protein kinase domain profile. 678 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2634 1013 Gene3D Ribonuclease Inhibitor 293 601 IPR032675 -
Alju01g2634 1013 Gene3D Phosphorylase Kinase; domain 1 647 753 - -
Alju01g2634 1013 SMART LRR_typ_2 105 129 IPR003591 -
Alju01g2634 1013 SMART LRR_typ_2 194 218 IPR003591 -
Alju01g2634 1013 SMART LRR_typ_2 385 409 IPR003591 -
Alju01g2634 1013 SMART LRR_typ_2 170 193 IPR003591 -
Alju01g2634 1013 SMART LRR_typ_2 242 266 IPR003591 -
Alju01g2634 1013 SMART LRR_typ_2 529 553 IPR003591 -
Alju01g2634 1013 SMART LRR_typ_2 361 384 IPR003591 -
Alju01g2634 1013 SMART LRR_typ_2 481 504 IPR003591 -
Alju01g2634 1013 SMART LRR_typ_2 313 337 IPR003591 -
Alju01g2634 1013 SMART LRR_typ_2 433 457 IPR003591 -
Alju01g2634 1013 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 329 602 - -
Alju01g2634 1013 ProSiteProfiles Leucine-rich repeat profile. 196 218 IPR001611 GO:0005515
Alju01g2634 1013 Pfam Leucine Rich repeat 265 282 IPR001611 GO:0005515
Alju01g2634 1013 Gene3D Transferase(Phosphotransferase) domain 1 754 966 - -
Alju01g2634 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Alju01g2634 1013 ProSitePatterns Protein kinases ATP-binding region signature. 684 706 IPR017441 GO:0005524
Alju01g2634 1013 SUPERFAMILY RNI-like 87 573 - -
Alju01g2634 1013 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 37 218 - -
Alju01g2634 1013 SMART serkin_6 678 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2634 1013 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 754 955 - -
Alju01g2634 1013 SUPERFAMILY Protein kinase-like (PK-like) 657 944 IPR011009 -
Alju01g2634 1013 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 193 946 - -
Alju01g2634 1013 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 219 328 - -
Alju01g2634 1013 Gene3D Ribonuclease Inhibitor 37 219 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2634 Alju-ChrAlju01 25731625 25740049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2634 458 572 Receptor kinase-like Gene Family AT5G07180 33.913 9.83e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Alju01g2634 Pkinase 1.2e-42 CL0016