Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2611 ATGGGTTTTTCAGCTCATCTCCTCCTTCTCTTATCTCTCCTGTTCTTTCTCTCTCACCCAACATGGGTCTCTGGAAATGAAGAGCTCAGAGCTCTAACGGACATGAAAGCTGCTCTTGACCCAGAAAGCCGTTATCTTTCTTCATGGACTTCAAATGGGAATCCATGTGACGGTTCTTTTGAAGGAGTGGCTTGCAACGAGAATGGTCAAGTTGCTAACATTTCCTTGCAGGGGAAGGGCCTATCTGGGAAGCTTTCGTCCGCCATTGATGGTCTCAAGCACTTAACAGGGCTTTACTTGCATTATAATGCTCTGTGCGGTGAGATACCCAAAGAAATAGCCAACTTGCCTGAGCTCACTGATTTGTATTTGAATGTGAATCACTTCACTGGGGAAATCCCAACTGAGATCGGAAAAATGGAGAACTTGCAAGTTTTGCAGCTTTGCTATAACCAATTGAAGGGAAGTATACCCACTCAGCTTGGTGGCTTGAAGAAGCTTAGTGTTCTTGCTCTTCAGTCAAATCAATTAACTGGTGCTATCCCTGCTGATTTAGGCAACTTGGAAATGTTAATGAGGCTTGACTTGAGCTCTAATCGCCTATTCGGTTCGATCCCCTCGAAATTAGCCGATGCCCTTTCTCTGCAAGTTCTTGATGTTCGGAACAATACTCTCTCTGGGAATGTACCACCTGCTCTCAAGAGGCTTGAAGATGGATTTTTGTATGAATACAATCTGGCATTATGTGGAGCTGGGTTTTCATCCCTGAAGACTTGCAGTGAAACTGACCATGTTGATCCTAGTGGGCTTGATCCTTATGGAGCCGGCATTAACGGTCACTCAACGAGGGACATTCCAGAAACTGCGAATGTTCAGTTGCCCTGCAATGGAACTCGGTGCCAGAAGTCTTCGAGATCCAAACAAACAACAACGTCTGTAACTGTTGGCATAATTGTGATTGCCATAGCAGTTTCAGCAGTTGGCATTCTAACCTTTGTACATTATCGCCGGAGAAAGCAAAAGCTCGGAAACTCCTATGATATCTCTGATAGCCGTCTAAGTACTGATCAAGCTAAGGCTGTCATATACAGGAAAAATGGCTCTCCTTTAATCAGCCTTGAGTACTCCAATGGGTGGGACCCTTTGGCTGATAGCAGGAACTTCAATGGGGATAGCCAAGACATGTTCCAAAGCTTCAGGTTCAACTTGGAAGAGGTTGAAACCGCGACTCAGTATTTCTCGGACTCGAATTTGTTGGATAAGAGTAACTTCAGTGCAACATATAAAGGAGTGTTGAGAGATGGGTCTGTGGTTGCTGTGAAGAGCATCAGCAAAAGTAGTTGCAAGTCAGATGAAGCTGAGTTTTTGAAGGGATTGAACATTTTGACATCACTGAGGAATGAGAATCTAGTGAGGCTCAGAGGCTTTTGTTGTTCTAGGGGACGAGGCGAGTGCTTTCTTGTCTATGATTTTGTCCCTAATGGGAATCTTTCACGCTACCTTGATGTAAAAGAAGGTGATGCACAAGTCCTTGAATGGTCAACCAGAGTTTCCATTGTCAAAGGGATTGCTAAAGGCGTTGCATATTTACATGCACACAAAGCGAACAAACCAGCACTTGTTCACCAAAACATCTCAGCTGAGAAAGTGCTCATTGATCAGCGATTCAATCCATTGCTTGTGGATTCTGGCCTCTGCAAGATCCTTACCAACGACGTTGTCTTTTCGGGGCTCAAGGCGAGTGCGGCGAAGGGCTATCTAGCTCCGGAGTACACGACCACCGGCCGGTTCACTGAGAAAAGTGATGTGTATGCTTTTGGAGTGCTTCTTTTGCAGATCCTCTCTGGGAAGCAGAAGATCACAAGCATGATGCGCCTCTTGGCAGAATCGTCGAGGTTCCTAGAAGTTATGGACCCGAATCTGCACGGAAAGTTCTTTGAATTCGAGGCAGCTAAGTTGTTGAAGATGGCTCTGGTTTGTTCCCATGAGTCTCCTTTTGAGAGGCCATCCATGGAAGCCATTGTTCAGGAACTGAACAATTGTAGTAGCTGTCTGTGA 2058 0.4538 MGFSAHLLLLLSLLFFLSHPTWVSGNEELRALTDMKAALDPESRYLSSWTSNGNPCDGSFEGVACNENGQVANISLQGKGLSGKLSSAIDGLKHLTGLYLHYNALCGEIPKEIANLPELTDLYLNVNHFTGEIPTEIGKMENLQVLQLCYNQLKGSIPTQLGGLKKLSVLALQSNQLTGAIPADLGNLEMLMRLDLSSNRLFGSIPSKLADALSLQVLDVRNNTLSGNVPPALKRLEDGFLYEYNLALCGAGFSSLKTCSETDHVDPSGLDPYGAGINGHSTRDIPETANVQLPCNGTRCQKSSRSKQTTTSVTVGIIVIAIAVSAVGILTFVHYRRRKQKLGNSYDISDSRLSTDQAKAVIYRKNGSPLISLEYSNGWDPLADSRNFNGDSQDMFQSFRFNLEEVETATQYFSDSNLLDKSNFSATYKGVLRDGSVVAVKSISKSSCKSDEAEFLKGLNILTSLRNENLVRLRGFCCSRGRGECFLVYDFVPNGNLSRYLDVKEGDAQVLEWSTRVSIVKGIAKGVAYLHAHKANKPALVHQNISAEKVLIDQRFNPLLVDSGLCKILTNDVVFSGLKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLLQILSGKQKITSMMRLLAESSRFLEVMDPNLHGKFFEFEAAKLLKMALVCSHESPFERPSMEAIVQELNNCSSCL 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2611 685 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 74 680 - -
Alju01g2611 685 Gene3D Ribonuclease Inhibitor 175 241 IPR032675 -
Alju01g2611 685 FunFam Leucine-rich repeat receptor-like kinase 27 136 - -
Alju01g2611 685 SUPERFAMILY L domain-like 29 235 - -
Alju01g2611 685 Gene3D Phosphorylase Kinase; domain 1 383 491 - -
Alju01g2611 685 Gene3D Ribonuclease Inhibitor 25 174 IPR032675 -
Alju01g2611 685 FunFam Protein NSP-INTERACTING KINASE 2 492 682 - -
Alju01g2611 685 FunFam Protein NSP-INTERACTING KINASE 2 138 260 - -
Alju01g2611 685 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Alju01g2611 685 Gene3D Transferase(Phosphotransferase) domain 1 492 684 - -
Alju01g2611 685 ProSiteProfiles Protein kinase domain profile. 413 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2611 685 FunFam Protein NSP-INTERACTING KINASE 2 384 491 - -
Alju01g2611 685 Pfam Protein tyrosine and serine/threonine kinase 419 678 IPR001245 GO:0004672|GO:0006468
Alju01g2611 685 SUPERFAMILY Protein kinase-like (PK-like) 389 679 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2611 Alju-ChrAlju01 25367483 25370683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2611 5 526 Miscellaneous Gene Families AT4G22730 55.744 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Alju01g2611 PK_Tyr_Ser-Thr 1.3e-35 CL0016