Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2604 ATGGAGTGCAATAAGGATGAGGCCACCAGAGCTAAAGAAATTGCTGAGAGGAAGTTTATTGCAAAGGATATTTTGGGTGCGAAGAAGTTTGCTTTAAAGGCCCAAAGATTATTTCCTGAGCTTGAGGGTATTTCTCAAATGCTAGCTACACTTGATGTGTATATTTCTGCAGACAATAAAATAAAGGGCGAATCAGATTGGTATGGTATACTCGGTGCAGATCCTCGGGCTGACGATGAAACAATCCGGAAAAAATATAGGAAGTTGGCTCTCATGCTTCATCCTGATAAGAACAAGTCTATTGGAGCTGATGGGGCATTTAAGCTTATTTCGGAGGCATGGAGTTTGCTGTCAGATAAGGCTAAAAAGGTAGTATATGATCAGAAGAGAAACACAAAAGTGCAGAAGGTTTCAACAAAGTCTTCTGGTGCATCTGCACATCCAGGGACTAATGGGAATTACAATTTTACAAAAACTGCCACTTCAAGTGCCAAAGCTCATAAACATACTACTAAACCAGACTCAACTTCTACACACAAGTCAAAATCAAATACTTTCTGGACTGTTTGCAATCGATGCAAAATGCAGTATGAGTATCTTAGAGTTTATCTTAATTTGAAACTCCTGTGTCCCAACTGCCATGGGGCATTTTTGGCTGTAGAGACTGCTCCTCCACCTGCAAGTGGTGTAAGACCTGCCGCCTCATTTAATTTTTCCCGGCAGCAGCAAAATTTCAATAACCAAGTGCCTAGTAAAAACAAATCAAATGCAGGAAAGAACAAGCCAACCTCAAAAGTTGGAGCATCCTATAACCCTACTGATTTCCAGTGGGCTCCATTTTCTAAAACTTCTGGTGTTTCAACAGCAGCTCAAGCTGCAAGTGTGGTTCAACAAGCATATGAGAAAGTGAAGCGAGAGCGTGAGGAGGCACAAGCAGCTACAAAAAGGGAACAGGCCTTACGAAGGAAGCAGCATGCTTCTAAAAAAGGTTATATGAACCCCAAAAGAAGAAGAGGCATGGAGGATTCTGGTGTGAGCGGCCATGGTAAGGAACCTTCAAATCAAGCAGGAATGAGAAATGGTATAGTAGGAGCAGGGAGCTCATGTGGTTCTAAACCTGGTAAATTTGATCGCATCTCAATTAATGGTAGCATGAAGACCAGTGGATCAGGAGCTTCCCAGCTTGAGCTTAATAATCTTCTCATGGTGAGAGCTAGAAATGAAATTGACAAGAAACTGAAGGATATTCGGACAAATACTATTTCCAAGAGAGCTGTGACAGAGAGTGGACATGGATATGAGAAAGAAAGTGAGAAAGGAGAAAAATTTATGTGTAGCTCAGAGAGATGTGATAAAAACAACCTCTGTAAGTCTGACAATAGGAATAGTGAGTTCCATGCCATCAAAACTTCTGCTGGGACTCCTATTGCTAATGTGGAGATAAAAACAGTGACAATTGATATCCCTGATCCTGATTTTCATGATTTTGATAAGGATCAAACTGATAGGTCCTTTGGTGAAAATCAAGTATGGGTTGCATATGATGATGATGATGGGATGCCTCGAATTTATGCTATGATTCAGAGTGTGATTTCTTTGAGTCCATTACAGATGCGGATCAGTTGGCTCAACTCAAAGACCAACGAAGAACTGGCCCCTCTAAATTGGATCATTTCAGGCTTTTCTAAAACTTGTGGGGAGTTTAGAATGGGTAGATGTGAAATCAATAACTCAGTTAATTCTTTTTCTCACAAGGTTAGATGGAGAAAAGGTGCCCATGGAGCCATTTGTATTTATCCCTTGAAAGGGGATGTTTGGGCTCTTTATAGGAACTGGTCACCTGATTGGAATGAGCTGACAGCAGACGAAGTGATACACAAGTATGATATGGTTGAGGTACTTAAGGATTTTAGTGAAGAAAATGGTGTTATGGTCATTCCCCTGGTAAAAGTGGCTGGCTTCAAGACATTATTTCACCGGCACTTGGACCCAAGAGAAATTAGGACCATTCCAAGAGAAGAGATGTTTCGGTTCTCTCATCAGGTCCCGTCATACTTGCACACAAGTAAAGAAAAACCAGATGTGGTGAGGGGTTGCTGGGAGTTGGACCCGGCTGCAACTCCATCTGAACTTCTTGAGGTTATAAAAGCTGTTAAAGACGAAGACATGGTAGGCATGGAGGATACTCCTGTAGAAGAAGCCCAGAATGATGACATCAAAAGACCTAATGATGAGGAAATGATAAATTATACAGGAAAAGTTGGGAATGACAAGGAGAAAAATGATAAAGATACTCGGGAAATTGGAACTTTCAAAGAGGACAAATAG 2328 0.4115 MECNKDEATRAKEIAERKFIAKDILGAKKFALKAQRLFPELEGISQMLATLDVYISADNKIKGESDWYGILGADPRADDETIRKKYRKLALMLHPDKNKSIGADGAFKLISEAWSLLSDKAKKVVYDQKRNTKVQKVSTKSSGASAHPGTNGNYNFTKTATSSAKAHKHTTKPDSTSTHKSKSNTFWTVCNRCKMQYEYLRVYLNLKLLCPNCHGAFLAVETAPPPASGVRPAASFNFSRQQQNFNNQVPSKNKSNAGKNKPTSKVGASYNPTDFQWAPFSKTSGVSTAAQAASVVQQAYEKVKREREEAQAATKREQALRRKQHASKKGYMNPKRRRGMEDSGVSGHGKEPSNQAGMRNGIVGAGSSCGSKPGKFDRISINGSMKTSGSGASQLELNNLLMVRARNEIDKKLKDIRTNTISKRAVTESGHGYEKESEKGEKFMCSSERCDKNNLCKSDNRNSEFHAIKTSAGTPIANVEIKTVTIDIPDPDFHDFDKDQTDRSFGENQVWVAYDDDDGMPRIYAMIQSVISLSPLQMRISWLNSKTNEELAPLNWIISGFSKTCGEFRMGRCEINNSVNSFSHKVRWRKGAHGAICIYPLKGDVWALYRNWSPDWNELTADEVIHKYDMVEVLKDFSEENGVMVIPLVKVAGFKTLFHRHLDPREIRTIPREEMFRFSHQVPSYLHTSKEKPDVVRGCWELDPAATPSELLEVIKAVKDEDMVGMEDTPVEEAQNDDIKRPNDEEMINYTGKVGNDKEKNDKDTREIGTFKEDK 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2604 775 MobiDBLite consensus disorder prediction 136 166 - -
Alju01g2604 775 PRINTS DnaJ domain signature 102 122 IPR001623 -
Alju01g2604 775 PRINTS DnaJ domain signature 86 101 IPR001623 -
Alju01g2604 775 PRINTS DnaJ domain signature 68 86 IPR001623 -
Alju01g2604 775 Gene3D DnaJ domain 63 182 IPR036869 -
Alju01g2604 775 MobiDBLite consensus disorder prediction 749 775 - -
Alju01g2604 775 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Alju01g2604 775 SUPERFAMILY Chaperone J-domain 63 134 IPR036869 -
Alju01g2604 775 MobiDBLite consensus disorder prediction 246 270 - -
Alju01g2604 775 Pfam Domain of unknown function (DUF3444) 485 690 IPR024593 -
Alju01g2604 775 Pfam DnaJ domain 66 127 IPR001623 -
Alju01g2604 775 MobiDBLite consensus disorder prediction 136 181 - -
Alju01g2604 775 SMART dnaj_3 65 122 IPR001623 -
Alju01g2604 775 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Alju01g2604 775 MobiDBLite consensus disorder prediction 306 320 - -
Alju01g2604 775 CDD DnaJ 66 119 IPR001623 -
Alju01g2604 775 PANTHER BNAC03G44070D PROTEIN 1 708 - -
Alju01g2604 775 MobiDBLite consensus disorder prediction 306 369 - -
Alju01g2604 775 Coils Coil 293 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2604 Alju-ChrAlju01 25196126 25198453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2604 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.043 1.53e-33 130