Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2588 ATGGAGTCTAGAATTGTTGATATTGATGAGAAGAAGCCAAGCGTGGAGGAGCATGGTGCAGATCAGAAGAAGAAGGCGATAATAATAAGGTACAGAGAATGCATGAAGAACCATGCAGCTTCAATAGGAGGGAACGCAACAGATGGGTGTGGTGAGTTCATGGCCTCAGAAGAAGACTCTCTCAAGTGCTCAGCCTGCAAATGCCACAGAAACTTCCACAGAAAATACTTTGAAGAATCTCAAGATTCTGATGATACCCCTTCTTCTTCTCCATATTACCATCTTCCTTCACAGATGATGATGCTTCTTCCAAATAATGATGTTGCTTGTGGTAATGATCAACATGATCAGGTCGTGAAACCCTTATTGACCCATGATTTGTGTCTCACAGATTATAATAAAAGTGGTTGTTCTGATCATGATGAGAGTGATGAAAAGAGAGTGATGATGGTGAAAAATAAGAGGTACAGGACAAAGTTCAGTGAAGAGCAGAAGGAGAAGATGCTGAGATTTGCAGACAAGGTTGGGTGGAGGATGCAGAAAGTGGATGAATCCATGGTTCAGCAATTTTGTGAAGAAGCTGGCATCAAGAGAAGAGCCCTCAAAGTGTGGATGCACAATAACAAGAACTCTTTTGCCAAGAGAAGAAACAACCTCATCTCCACTAGCTAG 672 0.4196 MESRIVDIDEKKPSVEEHGADQKKKAIIIRYRECMKNHAASIGGNATDGCGEFMASEEDSLKCSACKCHRNFHRKYFEESQDSDDTPSSSPYYHLPSQMMMLLPNNDVACGNDQHDQVVKPLLTHDLCLTDYNKSGCSDHDESDEKRVMMVKNKRYRTKFSEEQKEKMLRFADKVGWRMQKVDESMVQQFCEEAGIKRRALKVWMHNNKNSFAKRRNNLISTS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2588 223 SUPERFAMILY Homeodomain-like 144 214 IPR009057 -
Alju01g2588 223 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 19 211 - -
Alju01g2588 223 MobiDBLite consensus disorder prediction 1 20 - -
Alju01g2588 223 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 31 76 IPR006456 -
Alju01g2588 223 FunFam Zinc-finger homeodomain protein 2 140 214 - -
Alju01g2588 223 Gene3D - 137 214 - -
Alju01g2588 223 NCBIfam homeobox domain, ZF-HD class 154 210 IPR006455 -
Alju01g2588 223 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 30 75 IPR006456 -
Alju01g2588 223 Pfam ZF-HD protein dimerisation region 29 76 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2588 Alju-ChrAlju01 24916829 24917500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2588 19 217 ZF-HD Transcription Factor Family AT1G14440 44.550 3.74e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Alju01g2588 ZF-HD_dimer 5.8e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g2588 01 24916829 24917500 Alju01g2588 01 24916829 24917500 ECH