Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2586 ATGGCCACCTCCAGGCGGCTTAGGGCTTTCAAGCGATGGATGGCATCCCGGGGTTTTGAAATCAGCGATGGCCTGGAGTTCGTAGACGATCCTGAAAATGGAATTGCGGTGAGAGGTTTGTGCCAATTGAAGGAAGGCGATGTTGTCGCCAAAATACCCAAGGATGCCTGCCTGACGATTAAGACTAGTGGGGCGAGTCAAATGATTGAACACTCTGGTTTGGATGGTAATTTGGGATTAGCAGTGGCTCTCATGTATGAGAGAAGCTTGGGCGACAAGTCTCCCTGGGCTGGCTACCTTCAGCTTTTGCCTCACCATGAGTGCCTGCCGTTAATGTGGACTCTGAACGAAGTAAACGAGCTTTTGAGTGGGACTGAGCTACACAAGACAGTGCAAGAGGACAAAGCTCTTATGTATGAGGACTGGAAAGAGAATATTCTGCCCATCTTGGATTTTTCACCTTCAAAGCTTAACCCAAAATATTTTGGTGTAGAAGAATATTTTGCTGCAAGAAGTCTTATTGCTTCACGAGCTTTTGAGATAGATGATTACCATGGCTTTGGCATGGTTCCCTTGGCAGACCTATTCAATCATAAAACAGATGCTGAGGATGTGCATTTCACCGCTGTATCCTCAAACTATGAATCTGACAATGATGATAATGATGGAAATGAGTGTGTCACAGATGAAGAACTGGCAAAAAGTTCTTCTATGGATGAACCTGAATCGGATCCTGCTCTTATTGGGAAATGCAGTGGTGGCAACTTGGAGTCATCCTCAGTTGTGGTAGATGATCCTTCAATGTTGGAGATGATTATGATAAGAGATGTCAGCATTGGAGCTGAGGTATTTAACACTTATGGGTCAATGGGTAATGCTGCTTTACTTCATAGATATGGATTCACTGAGCAAGATAACTCCTATGATATTGTGAACATTGATTTGGAACTGGTTCTTCAGTGGTGTTCTTCTTTGTTTTCAGCTCGATACACTCGAGCAAGAGTCTCTTTCTGGAGAAAGCTGGGCTACTCTGCATGCATCAGCCAAAACTCAGAATATTTTGAGATATCATCTGATGGAGAACCACAGATCGAACTCCTGATTCTATTATACATTATGTTGTTACCAGAAGATGTGTACAATAAGTTAGACTTATCGGTGTCGGTTGCAGGAAATGTTCATGAATCAAGTGAAACATCTCTATCAGGAGATTGCAATATCTTGACAAAGAAAGCATCTGATATGAGTAAGGAATCCTTGCTGTCTAGAAAAGTTTGTGATGCTTTGTTGGCTGTAGCTGATATGCGTGAAAGTCTCTATGGTCTGAACTCAATAGAAGATGATATCGAGGCATTAGGAAGGTTTAACTGTGTTAGAGAAAGAAAGCTGTTTCATTCTTTGGTTCTGCGCATTAGTGAAAGGAAGATCCTTGAAAAGCTCAGAAATTATGCTGCCCAGCCAAATAGGATTGGTAAGAGAAATTCTGCAAGGAAGAAAATGAAAAGCAAAAAAAAGTAA 1518 0.4203 MATSRRLRAFKRWMASRGFEISDGLEFVDDPENGIAVRGLCQLKEGDVVAKIPKDACLTIKTSGASQMIEHSGLDGNLGLAVALMYERSLGDKSPWAGYLQLLPHHECLPLMWTLNEVNELLSGTELHKTVQEDKALMYEDWKENILPILDFSPSKLNPKYFGVEEYFAARSLIASRAFEIDDYHGFGMVPLADLFNHKTDAEDVHFTAVSSNYESDNDDNDGNECVTDEELAKSSSMDEPESDPALIGKCSGGNLESSSVVVDDPSMLEMIMIRDVSIGAEVFNTYGSMGNAALLHRYGFTEQDNSYDIVNIDLELVLQWCSSLFSARYTRARVSFWRKLGYSACISQNSEYFEISSDGEPQIELLILLYIMLLPEDVYNKLDLSVSVAGNVHESSETSLSGDCNILTKKASDMSKESLLSRKVCDALLAVADMRESLYGLNSIEDDIEALGRFNCVRERKLFHSLVLRISERKILEKLRNYAAQPNRIGKRNSARKKMKSKKK 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2586 505 CDD SET_LSMT 24 302 - -
Alju01g2586 505 PIRSF RMS1_SET 1 487 IPR011383 GO:0016279|GO:0018026
Alju01g2586 505 MobiDBLite consensus disorder prediction 212 249 - -
Alju01g2586 505 Pfam SET domain 36 288 IPR001214 GO:0005515
Alju01g2586 505 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 6 450 - -
Alju01g2586 505 Gene3D set domain protein methyltransferase, domain 1 3 301 - -
Alju01g2586 505 ProSiteProfiles SET domain profile. 23 288 IPR001214 GO:0005515
Alju01g2586 505 SUPERFAMILY SET domain 4 307 IPR046341 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2586 1 503 NAC Transcription Factor Family AT3G56570 56.449 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju01g2586 SET 6.9e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g2586 01 24885072 24888548 Alju01g2586 01 24885072 24888548 ECH