Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2577 ATGGATCCCCCACTCTGTGCTAATGGTTGTGGCTTCTTTGGATCTCACGAGAATAACAACATGTGCTCCAAGTGTTACAAAGATCATGTTCTCAAGCTCAATCAACAGATCTATGAATCAATGGGAAATATCACTATATCGTCTTCCTCTTCATCTGATGATCAAAATTTGCTTACTGCTGATGAACACAAGAATGATGAATCCTCGTCTGCTTCCAAATCTGATGAACCTAGACAGAAAAAGAGATGTAAGAGTTGCAACAAAAAGGTGGGACTAACAGGATTTAAGTGCCAATACGGAGACTTGTTTTGTGGGAAACACAGATATCCAGAAGAACATTCCTGCACAGTAGACTATAAGAAGATTGGTCGTGAACTCCTTCAGAAAAAGAACCCTCTAATCAAAGCTGATAAACTTTGA 420 0.3929 MDPPLCANGCGFFGSHENNNMCSKCYKDHVLKLNQQIYESMGNITISSSSSSDDQNLLTADEHKNDESSSASKSDEPRQKKRCKSCNKKVGLTGFKCQYGDLFCGKHRYPEEHSCTVDYKKIGRELLQKKNPLIKADKL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2577 139 Gene3D - 57 138 IPR035896 -
Alju01g2577 139 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 139 - -
Alju01g2577 139 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 38 - -
Alju01g2577 139 FunFam Zinc finger AN1-type containing 6 58 138 - -
Alju01g2577 139 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Alju01g2577 139 MobiDBLite consensus disorder prediction 45 83 - -
Alju01g2577 139 SUPERFAMILY AN1-like Zinc finger 65 137 IPR035896 -
Alju01g2577 139 ProSiteProfiles Zinc finger AN1-type profile. 77 123 IPR000058 GO:0008270
Alju01g2577 139 Pfam AN1-like Zinc finger 83 120 IPR000058 GO:0008270
Alju01g2577 139 MobiDBLite consensus disorder prediction 57 82 - -
Alju01g2577 139 SMART AN1_Zf_4 83 120 IPR000058 GO:0008270
Alju01g2577 139 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Alju01g2577 139 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2577 Alju-ChrAlju01 24805243 24805662 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2577 5 139 C2H2 Transcription Factor Family AT3G52800 39.869 1.82e-29 103