Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2564 ATGAACTGTTTTCACCTTTTGGTTCTGTTTCTTCTGTCAATGAACATGATGGTGCTTTCACAATTATTTCCAGATGAAAGAGCTGCTCTGTTGCTTCTGAGGGATTCCTTAACTTCTCCTTCTAATGATTTACATGGGAATTGGACAGGACCACCTTGTATAGACAACCTAAGTAGATGGAAAGGTATCACTTGTTTCAATTGGCATGTTGTTCAGATTGTTCTTGAAGGTTTCGAGCTTATTGGTTATTTGCCTCCTGCATTCCCTCAGAACATAACATTCTTGACTCAGCTTAACCTCAGAAACAATTCAATTTCTGGGACTCTGCCAAATCTCACCAACTTGGTGTTCTTGGAACATGTTTTGTTTTCATATAATCGCTTCTACGGGTCAATTCCATTGGAGTATGTTGGATTGTCTGGTTTAAAAGAATTGGAGCTGCAAATGAATTACTTAGATGGTCCAATCCCAGCTTTTGATCAATCTTCTTTGGATAGTTTCAATGTCTCTTATAATCATCTGGCTGGACCAATTCCTCAAACTTCTGTGCTGAAAAAATTCCCCAAGAGCTCTTTTGATAATAATTCAGATCTCTGTGGGAAGCCATTGGATATTTTGTGTCCTCTTCCTTCTCCAGCACCAGCTCCAAGCCCAGAAGCTCCCACAGAAAACAAGAGACTTGCAGTATGGATTATTGCTTTGCTTATTGCAGCACCTTCACTGGTTTTTGTACTGTTTACTATTGTCTTCTTGTTCTATAATAAAAAGGTTCATGCAAAAGAAACAGCCAGAAATGAATCTTCTGCAGGGTATGGTTTTCGAGCATGGGCGAAGAATATGATGTCCTATTCATTGAGCAACGAAGATCCTGTAAGGTCAGGCACATTGGAAATTTACAACAAGGAATACCCAATTTCTGACTTGGATGATTTATTAAGGGCATCAGCAGAAATGCTTGGTAAGGGAAGCTTAGGTACCACATACAAAGCAACACTTGAAACTGGTGCTATCGTTGCTGTGAGGAGACTTGATCACATGAACGGATTTGGCAAGAAGGAATTATTCCTCCAGCATATGCAATTGCACGCAAGGTTGAAGCATCAAAATCTGGTTGAAATCATCTCTTTCTATTACTCAGAGGAGCAAAAGCTGGTGGTTTATGAGTTTATCCCTAGTTGCTCTTTGTTTGAGCTACTTCATGATAGCAGAGTTCGAAGAACTCCACTTAATTGGTCCACAAGGCTAGCTATAATCAAAGACATAGCAAGAGGTCTAGCTTTTCTACATCACTCTTTGCCTTCACATAAGGCCCCTCATGCCAATCTAAGAACAAGCAATGTCCTTATCCATCAAGATTCTCAAGGCTACCATTCCAAGCTCACAGACTTTGGCTTCTTACCTTTGATTTCTAATAAAAAATCTGCAGAAAAGCTAGCAATCAGCAAGTCACCTGAATTTGTGCAAGGCAAGAAGCTGACACATAAAGCTGATGTATATTGCTTTGGAATCATCATCCTTGAGGTAATAACTGGGAAAGTTCCAGGTGAAAGCCTTGGTGAGAATGAAGAAACAACCAGTGATATTTCTGAATGGGTGAGAACAGTGGTGAACAATGATTGGTCCGCAGACATACTTGATGCAGAGATGTTAGCAGCAAGAGAAGGGCATGGAGCCATGTTTGAGCTAACAGAGATAGCTCTACAGTGTACTGATATGACACCAGAGAGACGGCCTAAAATGGATGAAGTTTTTGCAAGAATAGAAGAGATAGAGCAAATGAAGTCACAGAACGAGTGA 1797 0.4029 MNCFHLLVLFLLSMNMMVLSQLFPDERAALLLLRDSLTSPSNDLHGNWTGPPCIDNLSRWKGITCFNWHVVQIVLEGFELIGYLPPAFPQNITFLTQLNLRNNSISGTLPNLTNLVFLEHVLFSYNRFYGSIPLEYVGLSGLKELELQMNYLDGPIPAFDQSSLDSFNVSYNHLAGPIPQTSVLKKFPKSSFDNNSDLCGKPLDILCPLPSPAPAPSPEAPTENKRLAVWIIALLIAAPSLVFVLFTIVFLFYNKKVHAKETARNESSAGYGFRAWAKNMMSYSLSNEDPVRSGTLEIYNKEYPISDLDDLLRASAEMLGKGSLGTTYKATLETGAIVAVRRLDHMNGFGKKELFLQHMQLHARLKHQNLVEIISFYYSEEQKLVVYEFIPSCSLFELLHDSRVRRTPLNWSTRLAIIKDIARGLAFLHHSLPSHKAPHANLRTSNVLIHQDSQGYHSKLTDFGFLPLISNKKSAEKLAISKSPEFVQGKKLTHKADVYCFGIIILEVITGKVPGESLGENEETTSDISEWVRTVVNNDWSADILDAEMLAAREGHGAMFELTEIALQCTDMTPERRPKMDEVFARIEEIEQMKSQNE 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2564 598 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 594 IPR046959 -
Alju01g2564 598 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Alju01g2564 598 Gene3D Transferase(Phosphotransferase) domain 1 391 598 - -
Alju01g2564 598 ProSiteProfiles Leucine-rich repeat profile. 94 116 IPR001611 GO:0005515
Alju01g2564 598 ProSiteProfiles Protein kinase domain profile. 313 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2564 598 Gene3D Phosphorylase Kinase; domain 1 284 389 - -
Alju01g2564 598 Pfam Protein kinase domain 317 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2564 598 SUPERFAMILY L domain-like 23 190 - -
Alju01g2564 598 Gene3D Ribonuclease Inhibitor 24 208 IPR032675 -
Alju01g2564 598 SUPERFAMILY Protein kinase-like (PK-like) 317 591 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2564 Alju-ChrAlju01 24602841 24605428 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2564 32 596 Receptor kinase-like Gene Family AT1G68400 33.440 9.35e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju01g2564 Pkinase 5.5e-33 CL0016