Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2554 ATGGGACAACCAGTGGTAGTGTCCTCTTGTATCAATTACAAGTGGAAGTACGATGTGTTCCTTAGTTTCCATGGCGAAGACACTCGCTTAGGCTTCGTTGGCTTTCTTCGTGAATCTCTCCGTCAAAGAGGAGTCAATGTCTTTTATGATGACGATTCCATCAGAACCGGAGAGGAAATCACACCAGCACTTGTCAAAGCCATACAAGAATCCAGGATCGCTATTATAGTTTTCTCTGAGAACTATGCAAACTCCACATTCTGCCTGCAAGAACTTGAAAACATTCTTGAGTGCTTCATAGAAGAAGGTCGGTTTGTATATCCAGTTTTTTATTATGTGGATCCGTCAGAGTTGCGACGTCCTAGAGGAAGCTATGCAAAAGCCTTGGCTGGACTGGAGGAAAGATTTAAGGACGGCAAACAGAAAGTAGAAAGGTGGAGGTTTGCTTTGTGCCAAGCAGCAAACTTGAAGGGCTGTCATCTCAAACCCAAGATTGCAAAACAAGAAGAATGTATTAAAGAGATCATCAATGAGGTTTCTAAGCGTGCAATACTGTATTCTTGTGGTTTTCCATTAGCTTTGGAAGTGATTGGTTCTAACTTACGTGGTGAGGAGTTACGAGAAGTCAAGGATATGCTGTTATGTTTACATGGATCCCAACCAGAATATGCTATTGGGGTTTTGGTTGATAAATCCCTCATAAAAATTGAAGGAGATCGAGTGTTAATGCATGACTTAATAGAAGATATGGGTAGAGAGATTGTTCGACAAGAATCACCAAATGAACCTGGGAAACGGAGCAGGTTATGGAGCTACCACGATATTCTTCATGTTTTAAAACAAAATACAGGAACCAATAAAGTTGAAGTCATAGTTCTAGACCTACCTGGAGGTAGTAGAGCACAAATCCAATGGAGTCAAAAAGCATTCATGAAGATGACGAATCTCAAGATGCTTGTGATAAATAATACAAGATTTTCTAAATGTCCTCCACATCTCCCAAAAAGTTTACGTTGGTTGAAATGGACGGGGTATCCTTTCAAGTTTTTGCCATATAATATTAGCTCAACTGAACTTTTTTGTCTTGACTTGTCCTGTAGTTATTTTGATAACATCCAACCATTTACAAAGGTGTTCCACAATTTAAGTCGCATGAATTTTAGAAATTGTAAATTTCTACAACAAATCCCAAATTTATCTGGAGTTCCTAATTTAAGAGAATTGTGGTTTGATGGTTGTGCAAATTTAGTTGAAATCCATCATTCAGTTGGGTGTTTAAATAAATTGAAGGAATTGAGCGCCATGCGATGCAAGAACTTGGAGATGTTGCCATCATACCTTCGGTTGACATCTCTTGAGCATCTTAACCTCTTTGGTTGTTCAAGTCTCGGCAGTTTCCCAGACATATTAGCGGAGATGAAATATATACGAACACTTGATTTGGGCAGGACAGCCATTACTGCGTTGCCATCTTCAATTTGCAATCTCATTGGACTTGAAACCTTAAACATTGAGGAATGCCCTTATCTTGAGCAACTACCAGCTACCATTGTTCTGTTGCCAAATCTTTGGCAACTTAACGCAAATTTTTCAACAGTAATGACAAGATTTAAGATGTGTGGGGGAGGAGTAGAAGAAAACTTGGATTGCAATGCACTATCTTTGAAATTGAAACATTTTTGTTTCTCAAATTGCAATTTGTCAGATGACTCTCTTGCTCTTTGCCTCTCTTGCTTCACTAATATGATACGTTTAGATCTAAGTTTCAATAATTTTACAACGCTTCCAGCATGCATCAAAGAATGTCACAATTTGAGATATCTTCTACTGAATAATTGCAAGCGACTTCAACATATTGAGGAGGTGCCACCAAACTTGGAAAAATTCAGTGCCATATGTTGCATGTCATTGACTAGGTCATCTGAAAACAAAATATTGTATCAGGCACTCAACTTACAACCTGGGAATAGACACTTTATTTTGCCTGGAGCAAAATTCCCAGAAAATCTCCACAATTATAGCAGGGGAAGCTCTGTATCTTTTTGGATTCGTGACGTGTTTCCAACCATTTTTCTATGGATTCTTGTTAAAGTTGATCAGGATTTTCTCTCCAACTGTAGATTCCAGGTGCACGTCAATGACACCAAGCTAGATATATCTTCTGAGTGGCTGTTGTTATCAACATTGAAGATGGGCCATTTATACATATGTGATCTGCAAAGTATGATTAACAAGGCTGAACTCCCTCATGGATATAAATGGAACCATGTGAAAGTTTCCATCAAGAGCAATACACCAGAAATAAAAAATGGAAGGGATCAATTTCATTTTGCCCTTCATGTCTACAAACAACAAAATAACTCAGATACTATCCGATTCACAGACCCTCGAACAATGTATGAGGATAGCAACTCGTGGCAAAGAGTACAACAACCACAAGATTGGGAAGAACTTGAAGACGAATTACCTTACCAAGACCCAGCTCCAAGTGTGGACAATCTCAAAGCAAAGCGAGCATTATTTCCAACTGGATGGATTTATGATGTGACTGGTTTATTTCCTTTATACGTTGAGGAAATAGTTGAAGAATTTCCAGCGCCTTTTCTGGATGAATACCGGGTACAAGAGGTAATCTCACTTGTGGATGTTGAATCTAATGAGGGGGTCAAAATGGTAGGAATTTCCGGCGGTGGAATACGCAGATCAACAGTAACACATACTGTGTGTAATTCTATTGCTCATCATTTTGAAGATTTATGGTACTTTTACGGTGTTCGTGAAACAGCAAGAGGCTATGATTCCACGTGGGATGATTTCCAGAATTCGATGACACAACCCTGGTTCCCGCAGAGGAAGATTCTTGTAATTCTTGATTCTGTCAAAGAATTGGATCAGTTACTAGCAGTTAGAGAATGTAACCGGTTTGGGGAAGGAAGCAGGATCATTGTAGCGACGAGTGATAAACATTTTTTAGTAACTCATGGGATCGAAATAATTTTTGATGATGAATGGAATTCATTACTGTTAGAGAAGGAAAAAGACCCATATGAGCTTTTACTAGAGGAAGAAGATCTCAAGGCAAAGAGAAAGAAAATAGTTGAAGAATTTCCAGTGCCTTTTCTGGATGAATCCCGGGTACAAGAGGTAATCTCGCTTGTGGATGTTGAATCTAACGAGGGAGTCAAAATGGTAGGAATTTCCAGCGGTGGAATACGCAGATCAATAATAACACATGCTGTGTGTAATTCCATTGCTCATCATTTTGAAGATTTATGGTACTTTTGTGGTGCTCGTGAAATAGCCAGGGGCTATGATTCCACATGGGATAAGTTCCAGAATTGGATAACACAACCCTGGTTCCCTCAGAGGAAGATTCTTGTAATTCTTGATTCTGTCAAAGAATTGGATCAGTTACGAGCAGTTAGAGAATGTAATCGGTTTGGGGAAGGAAGCAGGATCATTATGGCGACAAGTGATAAACAGTTGCTAGTAAGTCATGGGTTCGAAATAATTTTTGATGATGAATGGAATTCATTACTGTTGGAGAAGGAAAAAGACCCATATGAGCTTTTACTAGAGAAAGAAGAAGATCTCAAGGCAAAGAGAAAGAAAATAGTTGAAGAATTTCCAGTGCCTTTTCTGGATGAATCCCGGGTACAAGAGGTAATCTCGCTTGTGGATGTTGAATCTAACGAGGGAGTCAAAATGGTAGGAATTTCCAGCGGTGGAATACGCAGATCAATAATAACACATGCTGTGTGTAATTCCATTGCTCATCATTTTGAAGATTTATGGTACTTTTGTGGTGCTCGTGAAATAGCCAGGGGCTATGATTCCACATGTTATTACAACTGTCGAAAGAGGGAAACAAATCAACTCAAGTGTCTTCCCGGAGATAATGGAACATTCAATTCTCATAATGGCCATTCTTGTCAGCAGACTCCTCACATGTGA 3954 0.3918 MGQPVVVSSCINYKWKYDVFLSFHGEDTRLGFVGFLRESLRQRGVNVFYDDDSIRTGEEITPALVKAIQESRIAIIVFSENYANSTFCLQELENILECFIEEGRFVYPVFYYVDPSELRRPRGSYAKALAGLEERFKDGKQKVERWRFALCQAANLKGCHLKPKIAKQEECIKEIINEVSKRAILYSCGFPLALEVIGSNLRGEELREVKDMLLCLHGSQPEYAIGVLVDKSLIKIEGDRVLMHDLIEDMGREIVRQESPNEPGKRSRLWSYHDILHVLKQNTGTNKVEVIVLDLPGGSRAQIQWSQKAFMKMTNLKMLVINNTRFSKCPPHLPKSLRWLKWTGYPFKFLPYNISSTELFCLDLSCSYFDNIQPFTKVFHNLSRMNFRNCKFLQQIPNLSGVPNLRELWFDGCANLVEIHHSVGCLNKLKELSAMRCKNLEMLPSYLRLTSLEHLNLFGCSSLGSFPDILAEMKYIRTLDLGRTAITALPSSICNLIGLETLNIEECPYLEQLPATIVLLPNLWQLNANFSTVMTRFKMCGGGVEENLDCNALSLKLKHFCFSNCNLSDDSLALCLSCFTNMIRLDLSFNNFTTLPACIKECHNLRYLLLNNCKRLQHIEEVPPNLEKFSAICCMSLTRSSENKILYQALNLQPGNRHFILPGAKFPENLHNYSRGSSVSFWIRDVFPTIFLWILVKVDQDFLSNCRFQVHVNDTKLDISSEWLLLSTLKMGHLYICDLQSMINKAELPHGYKWNHVKVSIKSNTPEIKNGRDQFHFALHVYKQQNNSDTIRFTDPRTMYEDSNSWQRVQQPQDWEELEDELPYQDPAPSVDNLKAKRALFPTGWIYDVTGLFPLYVEEIVEEFPAPFLDEYRVQEVISLVDVESNEGVKMVGISGGGIRRSTVTHTVCNSIAHHFEDLWYFYGVRETARGYDSTWDDFQNSMTQPWFPQRKILVILDSVKELDQLLAVRECNRFGEGSRIIVATSDKHFLVTHGIEIIFDDEWNSLLLEKEKDPYELLLEEEDLKAKRKKIVEEFPVPFLDESRVQEVISLVDVESNEGVKMVGISSGGIRRSIITHAVCNSIAHHFEDLWYFCGAREIARGYDSTWDKFQNWITQPWFPQRKILVILDSVKELDQLRAVRECNRFGEGSRIIMATSDKQLLVSHGFEIIFDDEWNSLLLEKEKDPYELLLEKEEDLKAKRKKIVEEFPVPFLDESRVQEVISLVDVESNEGVKMVGISSGGIRRSIITHAVCNSIAHHFEDLWYFCGAREIARGYDSTCYYNCRKRETNQLKCLPGDNGTFNSHNGHSCQQTPHM 1317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2554 1317 SUPERFAMILY L domain-like 256 648 - -
Alju01g2554 1317 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 184 - -
Alju01g2554 1317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 870 996 IPR027417 -
Alju01g2554 1317 Gene3D Ribonuclease Inhibitor 473 640 IPR032675 -
Alju01g2554 1317 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 777 997 IPR044974 GO:0006952
Alju01g2554 1317 SMART till_3 16 156 IPR000157 GO:0007165
Alju01g2554 1317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1040 1168 IPR027417 -
Alju01g2554 1317 Gene3D - 11 185 IPR035897 -
Alju01g2554 1317 Gene3D - 1022 1169 IPR027417 -
Alju01g2554 1317 Gene3D - 856 997 IPR027417 -
Alju01g2554 1317 Gene3D Ribonuclease Inhibitor 276 472 IPR032675 -
Alju01g2554 1317 SUPERFAMILY "Winged helix" DNA-binding domain 203 280 IPR036390 -
Alju01g2554 1317 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Alju01g2554 1317 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Alju01g2554 1317 Pfam TIR domain 16 181 IPR000157 GO:0007165
Alju01g2554 1317 Coils Coil 1188 1208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2554 Alju-ChrAlju01 24458417 24471193 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2554 212 537 WRKY Transcription Factor Family AT4G12020 36.152 6.71e-41 163