Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2552 ATGATTATGGCGGAGCGAACAACATCATCTTCTATCTCTTTCAAATGGACCTATGATGTGTTCCTTAGCTTCTATGGCGATGATACTCGCTTAGGTTTCATCAGCCATCTCTATGAAGCTCTGCGTCAAAGTGGAATTCATGCCTTTATTGATGATGAATTCATCAGGACTGGAGAACAACTCACACCTGCACTTTTCAAAGCTATAGAAGAATCAAGAATAGCCCTGGTAGTTTTTTCAGAAAACTATGCAAACTCAACATTTTGTTTGGAGGAACTTGTAAAAATTTTGGACTGCTTCAAGGAAGAAGGTCGGTTGATATATCCAATATTTTATTATGTGGATCCATCGGAATTGCGACGTCCAAGAGGAAGCTATGCAGAAGCATTGGCTCGATTGGAGGAACGATTCAAAGACAACAAGCACAAGGTGCAGAAATGGAGGATGGCTTTGTCTGAAGCTGCTGAACTCAAAGGCTGTCATCTCAAACCAAAGATTGCAAAAGAACAAGAGTGTATTGCAAGGATCATCAGTGAGGTTGCTACTAGGATCAATCAAGAGCCTTTGCATGTTACAAATTATCCAGTTGGACTTGTATCTCGAGTGCAGGAAGTAATCTCTTGTCTAGAACTTTGGTCCACTGTGGAAATTAAGATGATAGGAATTTGGGGAGCTGGTGGTATAGGTAAATCAACTATTGCAAGAGCTGTGTATAATGTGATTGCTGATAATTTTGAAGGCTTATGTTTTCTTTCCAATGTAAGAAAACAATCTAAAATGCCGAATGGTTTGTCATACCTTCAAGAGACATTATTATATAAATTAGTCAAGGAGAAAGATCTCAAATTGGGTGATTATCATGAAGGAATACCAATAATTGAACATCGGCTTAGTAAGAAGAAGATTCTTTTGATTCTGGATGATGTTGACAAATCCAACCAATTAGAAGCGCTTGCTGGAAGTTGTAATTGGTTTGGTCGTGGAAGCAGAATCATCATCACCACTAGGAATAAGCAACTGCTAGTGAGTCATGATATTGATGATAAAAGCATTTATGATGTTAAGGAATTAAATAATGAGGACTCTCTAAAGTTACTTAGTTGGTATGCCTTTAAAAAGGAAAACATGGACTCCAACTACATGGAGGTTTGCAATCGAGCAATACATTATTCATGTGGTTTTCCATTAGCTTTAGAAGTTATTGGCTCTAACTTGCGTGGTAAGGGAGTCAATTACTGGAGTTGTGCATTGGATCAGTTTGAAAAAAGACCACATGAAAGAGTTTTGGAAGCCCTAAAATTAAGCTATGATACTTTAGGGGATGTTGAGAAAAATGTTTTCCTTGACTTGGCTGTCTTCTTCAATGGCGAGAAATTAGAAGATGTCAACGATATGTTGCTATGTTTACATGGAATACAGCCAAAATATGCTATTGAAGTGCTAATTGACAAATCGCTCGTAAAGATTGAAGGAGACCGTGTAACAATGCATGATTTAATAGAAGATGTGGGTAAAGAAATTGTTCGGTTAGAATCACCACTTGAACCCGGTGAACGTAGCAGGTTATGGTTCTATCAAGACATTCTTCAAGTCTTACAACAAGACACGGGAACAAGTAAAATTGAAGCCATAATTCTAGACATACCTGAAGGAATAGAAATACAATGGAGCGGAGAGGCATTCATGAAGATGAAAAATCTCAAACTGCTTGTGATAAGAAAAGCATGCTTTTCTGAATGTCCCAAATATCTCCCAAACAGTTTAAGGTGGTTGGAGTGGAAAGGGTTTCCTTTCAAATTTTTACCATATATGCGCCCAACAGATCTAGTTTATCTAGACTTGTCCTACAGTTATTGTGAATTGCTTCAACCATTTGTTAAGAAGTTCTACAGTTTAAGTCGCATGAATTTTAGAAATTGTAAGCTTTTACAACAAGTACCAGACTTATCTGGAGTTTCTAATTTAAGAGAATTATTGCTTGATGGTTGCACAAACTTAACTGAAATTCATGATTCAGTTGGAAGTTTAAGTAAATTGAGAGAATTGAGTGCCATGCGATGTAAAAACTTGAAGATTTTACCATCTGGCCTTAGGTTGACATGTCTTCATCATCTCAACCTCTTCGGTTGCTCAAGTCTTGAGAATTTTCCTGAAATATTAGTCATGATGGAAGAAATGGAAACACTTGATTTAGACAAGACAGCAATCACTGAATTGCCCTATTCAATTTGCAATCTCACTGGACTTGAAATCTTAAACGTGGAGGAGTGTCCTAATCTTGAGCAACTACCAGCTAGTATTTGGACATTACCAAACCTTTGGGCACTAAACGCAAATTTTTCCAAAGGAATGAGGCATTTTAGGATGTGCGAAAGTGAAGAAGAAGCAAGCTCAGATTGCTCGTCAATTTCTTTGAAATTGGAACATTTTCATTTCTCAGAATGCAATTTATCAGATGACTCTCTTGCTCTTGGTCTTCCTCACTTTCCAAATATGACACATTTGGATCTAAGTTTTAATGATTTCACCATTCTTCCAGAATGCATAAAAGAATATCACAATTTGAAATATCTTTTGTTGGATAATTGCGAGCAACTTCTGCATATTCGGGGCATGCCACCAAACTTGGAAAAATTCAGTGCCATCTGTTGCACATCATTGACTAAGTTATCTAAAAGCAAAGTATTAAAGCAGGCACTCAACTTTCAACCTGGGAAAAGAAACTTTATTTTTCCAGGAAAAAAATTCCCAGAAAGGCTCCATAATTGTAGTCGAGGAAATTTTTTGTCATTTTGGGTCCGTAACATGTTCCCAGCCATTTTTCTATGGATTCTTGTTAAAGATGATCAAGATTATGTCTTCAATTGTAAATTTTCCGTGCACATCAATGACATCAAGCTAGATATTTCTTCTAAGTGGCTTTTACTATCAACTATAAAGACTGATCACATATATACATGTGATATGCAAAGCATAATTCAAAACATTGAGCTCCCCCATGTAAATAAGTGGAATCAAGTGAAGGTTTCCATCGAGAACAAAGCACCGGAAATAAAAGGTGAAAAAGAAATTTATTTTGGAGTTCATGTAAACGATCTGCAAGGTAACTTGGAAAATATTCAGTTCATGGACCCTAGAAGATACACTGATCACAACTTGTGGCAAAAAATACAAGAACAATCCCAAGATTCGGACGAACTGGAGGAAGATATGAGTTGGGATTCATACTCAGCAAAATCTGCCGAGTCAATTGAGAATACCATGGATTATCAAGTAGAACCACCAGAACATAAGGAAGAGCTTGAAGATATAATGCATCAAGATTCAGACTCAATGAAATCTAAAGTGCTACCGGGGAATACCATGAGCAATGAAGAACAACCGAAAGAATTGGATGAGCTTGAAAATGATGACAATCGAGGTTCAAATTCAACAGAGAACATCAAGTGTAATCATGAAGGAAAGATATTCTCGCATTCCTTCTGCACAAAGCTGATCACCTCGTTGGATTCAAAAGAGAAATGTGACTTTCGATTTAACTTGATTGCCACTCAATTAGATGCTGGAAGTTTGCATATGTTGATATTACCGAAAGTTCAGATCAATCAAATGAGTAAAATCAACATAATCTCATCATTATTCACAAATATAAAAGGAAAATGA 3663 0.3677 MIMAERTTSSSISFKWTYDVFLSFYGDDTRLGFISHLYEALRQSGIHAFIDDEFIRTGEQLTPALFKAIEESRIALVVFSENYANSTFCLEELVKILDCFKEEGRLIYPIFYYVDPSELRRPRGSYAEALARLEERFKDNKHKVQKWRMALSEAAELKGCHLKPKIAKEQECIARIISEVATRINQEPLHVTNYPVGLVSRVQEVISCLELWSTVEIKMIGIWGAGGIGKSTIARAVYNVIADNFEGLCFLSNVRKQSKMPNGLSYLQETLLYKLVKEKDLKLGDYHEGIPIIEHRLSKKKILLILDDVDKSNQLEALAGSCNWFGRGSRIIITTRNKQLLVSHDIDDKSIYDVKELNNEDSLKLLSWYAFKKENMDSNYMEVCNRAIHYSCGFPLALEVIGSNLRGKGVNYWSCALDQFEKRPHERVLEALKLSYDTLGDVEKNVFLDLAVFFNGEKLEDVNDMLLCLHGIQPKYAIEVLIDKSLVKIEGDRVTMHDLIEDVGKEIVRLESPLEPGERSRLWFYQDILQVLQQDTGTSKIEAIILDIPEGIEIQWSGEAFMKMKNLKLLVIRKACFSECPKYLPNSLRWLEWKGFPFKFLPYMRPTDLVYLDLSYSYCELLQPFVKKFYSLSRMNFRNCKLLQQVPDLSGVSNLRELLLDGCTNLTEIHDSVGSLSKLRELSAMRCKNLKILPSGLRLTCLHHLNLFGCSSLENFPEILVMMEEMETLDLDKTAITELPYSICNLTGLEILNVEECPNLEQLPASIWTLPNLWALNANFSKGMRHFRMCESEEEASSDCSSISLKLEHFHFSECNLSDDSLALGLPHFPNMTHLDLSFNDFTILPECIKEYHNLKYLLLDNCEQLLHIRGMPPNLEKFSAICCTSLTKLSKSKVLKQALNFQPGKRNFIFPGKKFPERLHNCSRGNFLSFWVRNMFPAIFLWILVKDDQDYVFNCKFSVHINDIKLDISSKWLLLSTIKTDHIYTCDMQSIIQNIELPHVNKWNQVKVSIENKAPEIKGEKEIYFGVHVNDLQGNLENIQFMDPRRYTDHNLWQKIQEQSQDSDELEEDMSWDSYSAKSAESIENTMDYQVEPPEHKEELEDIMHQDSDSMKSKVLPGNTMSNEEQPKELDELENDDNRGSNSTENIKCNHEGKIFSHSFCTKLITSLDSKEKCDFRFNLIATQLDAGSLHMLILPKVQINQMSKINIISSLFTNIKGK 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2552 1220 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 778 IPR044974 GO:0006952
Alju01g2552 1220 SUPERFAMILY "Winged helix" DNA-binding domain 427 533 IPR036390 -
Alju01g2552 1220 Gene3D Ribonuclease Inhibitor 545 720 IPR032675 -
Alju01g2552 1220 Gene3D Ribonuclease Inhibitor 721 903 IPR032675 -
Alju01g2552 1220 PRINTS Disease resistance protein signature 219 234 - -
Alju01g2552 1220 PRINTS Disease resistance protein signature 391 405 - -
Alju01g2552 1220 PRINTS Disease resistance protein signature 296 310 - -
Alju01g2552 1220 PRINTS Disease resistance protein signature 744 760 - -
Alju01g2552 1220 SMART till_3 17 157 IPR000157 GO:0007165
Alju01g2552 1220 SUPERFAMILY L domain-like 545 896 - -
Alju01g2552 1220 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 159 IPR035897 -
Alju01g2552 1220 MobiDBLite consensus disorder prediction 1107 1147 - -
Alju01g2552 1220 Pfam TIR domain 18 184 IPR000157 GO:0007165
Alju01g2552 1220 Gene3D - 356 440 IPR042197 -
Alju01g2552 1220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 450 IPR027417 -
Alju01g2552 1220 Gene3D - 11 184 IPR035897 -
Alju01g2552 1220 Gene3D - 185 349 IPR027417 -
Alju01g2552 1220 ProSiteProfiles TIR domain profile. 16 181 IPR000157 GO:0007165
Alju01g2552 1220 MobiDBLite consensus disorder prediction 1126 1142 - -
Alju01g2552 1220 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 186 - -
Alju01g2552 1220 Pfam NB-ARC domain 204 436 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2552 Alju-ChrAlju01 24391364 24402176 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2552 18 787 WRKY Transcription Factor Family AT4G12020 31.414 9.15e-79 284