Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2550 ATGCTTTGGTTTCAAGGGACCTGGCTTCCCTCCGCTGTCAGCCCCGCAAATCACAGGTTTATCACAAACAGAGCAGCCATGGCACTGCGAGCAGCATCCTTTGGCGTCTCTTATAGGTGGACCTATGACGTGTTTCTTAGTTTTAGGGGTGAAGATACTCGCTCAGGTTTTACGGGTAATCTCTACAATACCCTACGTCAGAGGGGATTTTGCTCCTTCATTGATGATGAAGATCTTAGAAGAGGGGAAGAAATTACACCAGCTCTTTTCGAAGCCATCCAACAATCGAGAATTGCTATCGTAGTTTTGTCCAAAAATTACGCATTCTCAACATTTTGTCTCGATGAGCTTGTGAAGATATTAGAGTGCTTCAGGGAAGGAAGTCAAGAGGTTTGGCCTGTCTTTTACGACGTCGATCCTTCAGACGTACGGAATTTGAGAGAGAATTTTGGAGAAGCATTGGTTCAGCACCAGAATAGGTTTAAGGACGACGAGGAGAAGGTTCAAAAATGGAGGTTGGCCTTGTCTAAAACAGCCAATTTTTCGGGCTGGCATATAAAATGCGGGGTTGGATATGAATATGAATTTATTGGAAGGATTATTGATGAAGTCTCTCGTAAGATCAATTATACTCCTTTACATGTTGCTGATTGTCCTGTTGGACTTGTTTCTCGGGTGCAGAAAGTTACCTCACTTCTAGATCTTTCATCTGAAGGGAATGTTATCATGGTAGGAATTCGGGGGATTGGTGGAATAGGTAAATCTACTGTTTCAAGAGCTGTGTATAACTCGATTGCTGATACTTTTGATGGTTCGTGTTTTCTTTCTAACATTAGAGAAATTTCTGATAAGAAAGGCCTAATACATCTCCAGGAAACATTAATTTCTAAATTAGTGAAGGAGAAGGATGTCAGTTTGGGAGATGTTCATGAGGGAATCTCAATACTAAGACATAGGCTTAATCGAAAGAAGGTTCTTTTAATTCTTGATGATGTTGTCAAATTGGACCAGCTACAAGCACTTGCTGGAAGATGCAATTGGTTTGGTTTTGGAAGTAGAATCATCATTACAACAAGGAATAAACATTTGTTAGTAAGTCATGGGATTGAAAGAGTATATGATGTTGAAGAATTAAATGACGAGGAAGCACTGAAGTTGTTTAGTTGGAAGGCATTTAAGAAGGGCAAGGTGCATTCAAGTTACAGAGATGTCATAGATCGTGCAATACGTTATTCAAGCGGCCATCCATTAGCTTTGGAAGTGATAGGCTCTAACTTATGTGGTAAAAGAATAGATGAATGGAGTTCTGCATTAGATTGA 1320 0.403 MLWFQGTWLPSAVSPANHRFITNRAAMALRAASFGVSYRWTYDVFLSFRGEDTRSGFTGNLYNTLRQRGFCSFIDDEDLRRGEEITPALFEAIQQSRIAIVVLSKNYAFSTFCLDELVKILECFREGSQEVWPVFYDVDPSDVRNLRENFGEALVQHQNRFKDDEEKVQKWRLALSKTANFSGWHIKCGVGYEYEFIGRIIDEVSRKINYTPLHVADCPVGLVSRVQKVTSLLDLSSEGNVIMVGIRGIGGIGKSTVSRAVYNSIADTFDGSCFLSNIREISDKKGLIHLQETLISKLVKEKDVSLGDVHEGISILRHRLNRKKVLLILDDVVKLDQLQALAGRCNWFGFGSRIIITTRNKHLLVSHGIERVYDVEELNDEEALKLFSWKAFKKGKVHSSYRDVIDRAIRYSSGHPLALEVIGSNLCGKRIDEWSSALD 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2550 439 Gene3D - 214 370 IPR027417 -
Alju01g2550 439 Gene3D - 36 213 IPR035897 -
Alju01g2550 439 PRINTS Disease resistance protein signature 412 426 - -
Alju01g2550 439 PRINTS Disease resistance protein signature 319 333 - -
Alju01g2550 439 PRINTS Disease resistance protein signature 243 258 - -
Alju01g2550 439 SUPERFAMILY Toll/Interleukin receptor TIR domain 37 184 IPR035897 -
Alju01g2550 439 Pfam NB-ARC domain 226 437 IPR002182 GO:0043531
Alju01g2550 439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 439 IPR027417 -
Alju01g2550 439 Gene3D - 377 439 IPR042197 -
Alju01g2550 439 FunFam Disease resistance protein (TIR-NBS-LRR class) 38 210 - -
Alju01g2550 439 ProSiteProfiles TIR domain profile. 40 208 IPR000157 GO:0007165
Alju01g2550 439 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 42 439 IPR044974 GO:0006952
Alju01g2550 439 SMART till_3 41 181 IPR000157 GO:0007165
Alju01g2550 439 Pfam TIR domain 42 210 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2550 Alju-ChrAlju01 24320645 24323379 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2550 220 430 WRKY Transcription Factor Family AT5G45050 34.123 1.08e-31 126