Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2542 ATGGCTATGATATCTTGTTCTTATGCTCAAGGATGGACCTATGATGTTTTCCTAAGTTTCAGAGGCACAGACACCAGAAGAAGTTTCACTGGCTTTCTGTATCATGCTCTGTGTCAGAAGGGGATTAACGCTTTCATAGATGATGAGGAGCTCAAGAGAGGGAAAGAGATTTCTCCATCTCTTCTCAAAGCGATTGAAGAGTCAAGGATTTCTGTCATTATATTCTCAGAAAACTATGCATCTTCCACGTGGTGTCTCGAGGAGCTTGTTAAGATCCTTGATTGTATGAAAGTCAAGGGGCAATTGGTTTTGCCGGTTTTTCACTATGTAGATCCATCAGTGGTACGCCATCAAAAGGGAAGTTTTGGGTTAGCCATGGCCAAGCACGAAGATAGATTCAAGAATAATGTGGAGAAAGTGCAGAAGTGGAAGTTGGCTTTGTTTGAAGCAGCTAACTTGTCTGGTTGGAGCTTAGAAAATGGGTATGAATTTGAGCTTATTCAAAAGATTGTTGAAGAGGTCTCTGGAAAATTAAATCACACCCTCATGCACATTGCTGAATATCCAGTTGGATTGGACACTCGTTTATCGGAAGTGAATTCACTTCTGCATATGGAGCCTGGTGAACATATTCGAATGATAGGAATCTATGGATTTGGAGGTATAGGAAAAACAACTATTGCTAGAGCTCTGTTTAACTTGATTGCCAATCAATTTGATGCTGCATGTTTCCTTGCTGATATTAGAGAAAGTTCAAATCAACCAAAAGGCTTAGTACAGCTCCAAGAAGCACTTCTTTTTGATTTAGTTGGGGACAAGAACATTAAGTTAGGAAATATTTACAAAGGAATCCCCATTTTGAAGAAAAGATTGTGCTGCAAAAAGATTCTGCTGATTCTTGATGATGTCGACAAATTAGAGCAGGTACAAGCTTTAGCAGGAGGACGCGATTGGTTTGGTGCCGGTAGTGTAATTGTGATCACAACAAGAGATAAACACTTACTAGCTACTCATCAAGTTGAAAAAACTTATGAGGTAAAGAAGCTGCATCATAGTGAAGCCTTTGAATTGTTCTCTTGGAATGCCTTCAAAAGAAAATCACCGGATTCAAGTTATTTTGAGATTTCACACCGCGTGGCTCTATATGCAGAAGGGCTTCCATTGGCTTTGCAAGTGATGGGTTCAAATTTGTATGGTAAAACAGTGGATGAGTGGCAAGATGCACTGGACAATTATGAAAAAATTCCCAACAAAGAGGTTCAAAATGTACTCAGAGTAACCTATGATAATTTGGAGGAGAATGAGAAAGAAATTTTCCTAGATATAGCATGCTTCTTCAAGGGGGAGACAAGAGAATATGTTGAAAAGACACTAAAAGCCTGTGGGTTCTATCCAACATTTGGCATTAGTGTGCTAATTGATAGATCTCTTATAACTATTGATGAGTATAACAAATTAAGAATGCATGATCTAATACAAGATATGGGAAGGGAAGTTGTAAGGGAAGATTCTCCGTTAGAGCCAGGAAATCGGAGTAGAATATGGCACCCTGAAGATGTTTTTGAAGTACTCACTCAAAATACTGGGTCAAGCAAAATTCAAGGCATGATGGTGAACCTCCCAGATCATTATATGGTACACTTGACAGCAAGTACCTTCAAAAGGATGAGAAATATGAAAATTCTTATAGTTAAGAATGCGCACATTTTTGGAAGCCCTCAACATCTTCCAAACAATTTAAGATTGCTTGATTGGACAGAGTACCCCTCTTCATCATTGCCATCGAATTTTCATCCAAGGAAACTTGTTGTCCTCAATTTATCTAGTAGTTGTTTTACCATGCAGGAGCCATTCAAGTATTTTGACTCTTTGACATCTATGGATTTGAGCTATTGTGATCACTTAACAAAACTACCTGACATTTCTGGAGCTCCAAACTTGGCAGAATTAAATCTTGATTATTGTGCAAATTTAGAAGAGGTTCATGATTCTGTTGGATTTCTTGACAAACTTGTAGAGTTGAGGGCTTCCGGATGCACCAAACTAAGGGCATTTCCACATGTCATTAGGTTGCCATCACTCAAAAGTTTGATCCTTATATGGTGTTCAAGCATTCAAAGATTCCCAGAGATCCTAGGAAAAATGGAGAATCTTGTATCCATTTCTATTGAAAGTAGTGGCATAGAAGAATTACCAGTTTCCATTGGAAACCTTGGTGGACTTCAAGAACTATGTATGACTTCTTGCTTGAGTCTCAAGGAACTACCCAAAAACCTTGACATGCTACAAAATCTAAGAAACCTTGACATGGAGGGCTGTCCACAACTTCGAAATTTTTTGAAGAAGTTGAAAGACATGGGACGACATACCCCTACCTTTGATAATGTTGATTCATTGAATCTAGAAAATTGTGGCCTATTAGATGAAGATCTTCCCATAATCTTACATTCTTTTCCCAAGTTGACTTCACTAGACCTTTCATGGAACAAATTTGTAATGCTTCCATCCTGCATAGAAGAGTTTCTTTACTTGCAATTACTTCACTTATGCAGTTGCAAGTTTCTCCAAGAAATTCCAAGCTTACCTCCTAATCTACAATTCATTAATGCAAGTAGCTGCACATCATTGAATGCAAAGTCATCAAATTTATTATTGGGACAGGAAACCTTTCAGGAAAGGGAGTTACATGTTATGGTGCCTGGAGCAAGCATTCCAAAGTGGTTTGATCTCTGCAACAAAGGAGAATATATGACATTTTGGGTTCGTGAAAATTTTCCAGTGGTTGCTCTATGTTATGTTTTTGCAGTTGAGGTTGAAATGAACAAGGATTTCAGTTGTGAAGTTCGCTTTTTTATTGATGGCGAAGAATTGTTTGAATTGGAAATACGAACAAGCTTCTCAAAAAAGATGACAGATCATGTTTGGCTATTCGATTTGCGAACTCTGCCTCAATTCCAGGAGAACCCGTTTGATTCTTATTTAGGTGATAACTGGAATCAGGTGGAGATTTCTTGTGACATAGTGTCTAAAGTTCCAAATGTAACTGTGAGTTTTTGTGGTATACATGTAAGCAAACAAGGAGAAAACTCTATCAGATTCACAGACCCTTACTCGGATTCTGATTCCATCACAGAATCTGATAACAGCGAGACCGAATTGAAGATTCTCGCTAGTAATGGCAAGTCAGTGGAAGATTTTCAAGTCTTCAAGGATAACTTGGAAGCGTGTAAGACAGAGGGTAGAAAAATGCTTGAATTCTGGGGAGATGAGATAAACACAACTCAAGATGATGAGGAAATGGAAGTATTTTATGCTTCTTTAGAAGCTGAATCCTTTGTTCCATTACCTTCAAAAGATATCAAATCTATTTCTGAATTGAAGACAGATATCAAACCAAGTGAAGAAGTCCAAAAAGCATGGAAGACATTTCAAGAATTTCTTACCAAAGATTTTTCTGAAATGTTAGAGCCTAAAAGTTATAGCACCATGAAAGCTACATTAGATTGCCTCTCTGGATTTTCTGCAGATGATGGGGTTTCAGTAGAAATGAGATCAATTATCATTGAAGTTTCAAGAGAGTTTACTCATTGGAGTTGGGATTACAGCAATGCAAGCAAGAAGATGGAGATTACCAGAGCCAGCATGTTGAAAGTGCATGAAATAGCTGAGGGTCTTGAAGCTAATAAGAGCCATTTCAAGGAAGTGATGAGCATGAAATGTGAGTTGCAGAGCCAATTGGCTTATTTAGAGGAGAGAAAGAAAGAGCTAGAGGATCAAATCAATGCCATTAAATCTGATATCAATGCTTTTGAATCAGCTAAGAAAATGGCTACTAATAGAAAGAGAGAAATTTTTGAGGAAGGAAAGCTACTAAAAGCTGAAAGAGATGAGTTGAGAGAACAATTGCCACGCTTGAGGGATGACTGGGCACTGGCTGAGGAGATCCAAACAAATATCAATACTGAATGGTCAAAACTTGGAGAGAAAATAAACAACAAAAGTATATATTTTTTGAGTGAAATATAG 4026 0.3795 MAMISCSYAQGWTYDVFLSFRGTDTRRSFTGFLYHALCQKGINAFIDDEELKRGKEISPSLLKAIEESRISVIIFSENYASSTWCLEELVKILDCMKVKGQLVLPVFHYVDPSVVRHQKGSFGLAMAKHEDRFKNNVEKVQKWKLALFEAANLSGWSLENGYEFELIQKIVEEVSGKLNHTLMHIAEYPVGLDTRLSEVNSLLHMEPGEHIRMIGIYGFGGIGKTTIARALFNLIANQFDAACFLADIRESSNQPKGLVQLQEALLFDLVGDKNIKLGNIYKGIPILKKRLCCKKILLILDDVDKLEQVQALAGGRDWFGAGSVIVITTRDKHLLATHQVEKTYEVKKLHHSEAFELFSWNAFKRKSPDSSYFEISHRVALYAEGLPLALQVMGSNLYGKTVDEWQDALDNYEKIPNKEVQNVLRVTYDNLEENEKEIFLDIACFFKGETREYVEKTLKACGFYPTFGISVLIDRSLITIDEYNKLRMHDLIQDMGREVVREDSPLEPGNRSRIWHPEDVFEVLTQNTGSSKIQGMMVNLPDHYMVHLTASTFKRMRNMKILIVKNAHIFGSPQHLPNNLRLLDWTEYPSSSLPSNFHPRKLVVLNLSSSCFTMQEPFKYFDSLTSMDLSYCDHLTKLPDISGAPNLAELNLDYCANLEEVHDSVGFLDKLVELRASGCTKLRAFPHVIRLPSLKSLILIWCSSIQRFPEILGKMENLVSISIESSGIEELPVSIGNLGGLQELCMTSCLSLKELPKNLDMLQNLRNLDMEGCPQLRNFLKKLKDMGRHTPTFDNVDSLNLENCGLLDEDLPIILHSFPKLTSLDLSWNKFVMLPSCIEEFLYLQLLHLCSCKFLQEIPSLPPNLQFINASSCTSLNAKSSNLLLGQETFQERELHVMVPGASIPKWFDLCNKGEYMTFWVRENFPVVALCYVFAVEVEMNKDFSCEVRFFIDGEELFELEIRTSFSKKMTDHVWLFDLRTLPQFQENPFDSYLGDNWNQVEISCDIVSKVPNVTVSFCGIHVSKQGENSIRFTDPYSDSDSITESDNSETELKILASNGKSVEDFQVFKDNLEACKTEGRKMLEFWGDEINTTQDDEEMEVFYASLEAESFVPLPSKDIKSISELKTDIKPSEEVQKAWKTFQEFLTKDFSEMLEPKSYSTMKATLDCLSGFSADDGVSVEMRSIIIEVSREFTHWSWDYSNASKKMEITRASMLKVHEIAEGLEANKSHFKEVMSMKCELQSQLAYLEERKKELEDQINAIKSDINAFESAKKMATNRKREIFEEGKLLKAERDELREQLPRLRDDWALAEEIQTNINTEWSKLGEKINNKSIYFLSEI 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2542 1341 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
Alju01g2542 1341 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 442 IPR027417 -
Alju01g2542 1341 Gene3D - 7 181 IPR035897 -
Alju01g2542 1341 Pfam NB-ARC domain 198 426 IPR002182 GO:0043531
Alju01g2542 1341 Gene3D - 348 432 IPR042197 -
Alju01g2542 1341 Gene3D - 182 346 IPR027417 -
Alju01g2542 1341 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 156 IPR035897 -
Alju01g2542 1341 SUPERFAMILY L domain-like 487 877 - -
Alju01g2542 1341 Gene3D Ribonuclease Inhibitor 707 885 IPR032675 -
Alju01g2542 1341 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 710 IPR044974 GO:0006952
Alju01g2542 1341 Coils Coil 1281 1308 - -
Alju01g2542 1341 Gene3D Ribonuclease Inhibitor 525 706 IPR032675 -
Alju01g2542 1341 SMART till_3 13 153 IPR000157 GO:0007165
Alju01g2542 1341 PRINTS Disease resistance protein signature 290 304 - -
Alju01g2542 1341 PRINTS Disease resistance protein signature 383 397 - -
Alju01g2542 1341 PRINTS Disease resistance protein signature 213 228 - -
Alju01g2542 1341 PRINTS Disease resistance protein signature 760 776 - -
Alju01g2542 1341 Pfam TIR domain 14 183 IPR000157 GO:0007165
Alju01g2542 1341 Coils Coil 1239 1273 - -
Alju01g2542 1341 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2542 Alju-ChrAlju01 24261390 24266523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2542 14 786 WRKY Transcription Factor Family AT4G12020 31.000 1.22e-93 332