Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2536 ATGTCCTTATCCATCAAGATTGTCAAGGCTACCATATATCAGCTCACAGATTTTGGCTTCTTACCTTTGATTTCTGCTAAACAAGCTGCAGAAAAGCAAGCCATCAGCAAGTCACCTGAATACATGCAAGGCAAGAAGCTAACACATAAAGCTGATGTATATTGCTTTGGAATCATCACCCTTGAGGTACTAACGGGGAAGTTTCAGATATTAGCAGCAAGAGAAGGGCATGAAATTATGTTTGAGCCAACAGAGATAGCTTTACCGCGTAGAGATATGATCCCTGAGAGACGGCCTAATTAA 303 0.4125 MSLSIKIVKATIYQLTDFGFLPLISAKQAAEKQAISKSPEYMQGKKLTHKADVYCFGIITLEVLTGKFQILAAREGHEIMFEPTEIALPRRDMIPERRPN 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2536 100 Pfam Protein tyrosine and serine/threonine kinase 10 67 IPR001245 GO:0004672|GO:0006468
Alju01g2536 100 SUPERFAMILY Protein kinase-like (PK-like) 13 74 IPR011009 -
Alju01g2536 100 ProSiteProfiles Protein kinase domain profile. 1 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2536 100 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 71 IPR046959 -
Alju01g2536 100 Gene3D Transferase(Phosphotransferase) domain 1 4 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2536 Alju-ChrAlju01 24061378 24061781 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2536 15 68 Receptor kinase-like Gene Family AT5G20690 48.148 2.51e-14 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju01g2536 PK_Tyr_Ser-Thr 2.3e-06 CL0016