Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2499 ATGGATCCACCACGCTGCGCTAACGGCTGTGGCTTCTTCGCCTCTCACGAGAACCAAAACATGTGCTCCAAGTGTTATGAGGATCATGTTCTCAAGCTCAGTCTAGAGATATGTGAATCAACATCTTATGACCAAGATATGCATACAGCTGATGTGCTCATGAACGATGAGTCTTACAAGGATCATATTATTAAGCTCAGTCAACAAATTTGTGAATCATCTTCTTTTTCATTTTATGATCAATATTTGCATACAGCTCATGAGCACAAGGACATGAATTTTTTATTCTCTGCTTCTAAACTTGATGAATCTAAAAAGAAAAAGAGGTGCAAGACCTGCAACAAAAAGGTGGGAATAACAGGATTCAAGTGCCGATGTGGACACTTGTTTTGTGGGAAACACAGATACCCAGAAGAACATTCATGCACGGTAGACTATAAACAGATTGGTCGTCAACTCATTCAAAAACAGAACCCTCTTTGTAAAGCGGATAAATTGTTATTAAGAGTTTAG 513 0.3879 MDPPRCANGCGFFASHENQNMCSKCYEDHVLKLSLEICESTSYDQDMHTADVLMNDESYKDHIIKLSQQICESSSFSFYDQYLHTAHEHKDMNFLFSASKLDESKKKKRCKTCNKKVGITGFKCRCGHLFCGKHRYPEEHSCTVDYKQIGRQLIQKQNPLCKADKLLLRV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2499 170 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Alju01g2499 170 SMART AN1_Zf_4 110 147 IPR000058 GO:0008270
Alju01g2499 170 ProSiteProfiles Zinc finger AN1-type profile. 104 150 IPR000058 GO:0008270
Alju01g2499 170 FunFam Zinc finger AN1-type containing 6 85 165 - -
Alju01g2499 170 Gene3D - 84 165 IPR035896 -
Alju01g2499 170 Pfam A20-like zinc finger 5 26 IPR002653 GO:0003677|GO:0008270
Alju01g2499 170 Gene3D - 1 47 - -
Alju01g2499 170 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Alju01g2499 170 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 166 - -
Alju01g2499 170 Pfam AN1-like Zinc finger 110 147 IPR000058 GO:0008270
Alju01g2499 170 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 37 - -
Alju01g2499 170 SUPERFAMILY AN1-like Zinc finger 102 164 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2499 Alju-ChrAlju01 23509965 23510477 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2499 6 166 C2H2 Transcription Factor Family AT3G52800 32.919 1.39e-26 97.4