Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2491 ATGAACCACAAAGCCTCCGTCTCTAAGGAGCTCAATGACAAGTTCTCCAAGATCTTAGAGGGTCTTCTTAAGCTGCCTGAAAACAAGGAATGTGCTGACTGCAGAAACAAGGCACCACGATGGGCAAGTGTGAATCTAGGAATTTTCATATGCATGCAATGTTCGGGAATTCACCGAAGTCTTGGAGTTCATATATCAAAGGTGCGGTCTACAACTTTGGATACATGGTTACCAGAACAAGTCTCTTTCATGCAATTCATGGGTAATGAGAAGTCAAATGAGTATTGGGAGGCAGAACTGCCGCGGAATTTTGATAGAATTGGATTCGGACTCGAGAAGTTTATTTGTTCCAAGTATGTGGAGAAAAGGTGGGCTAAAATTGGTGGAGTAAGTCCAGCTTCAAAAGCAGGTGAAATAATCTGTAATCTGAATCTGAATGTGCCACCACCTGGTCCTAAAGGTGGCTTTTCAAGGGCCAATAGGAGACTTTCTCTTGAGGAAAGCATTCTCAGAAGCCACATGGAACAGATCGTGCCTCCGGTGACAAGACATCGTGGGGGTTCTCTTGACATTCCAAAAAGTACCACCATTACTCCGGGAAGGAGGCAGTGTCCATCAGTTGATTTTGACAAGTCCCCAATCAACAATATGAATGCTGACTTTTTCAGCATGTTTGGCGTCCATGGTGATAAGAAGGACTCTGTAACTGTGCCTCCTACTAGCTGGACAACTTTTGACTGTAAGACAATGATACTTGCATCATACTTCATCTTCTATCATCTCTCTTATTTTTTGATATTTAGTTCTATACCTCCAGTTCTTAATATAAGATCTAGATATCTATGGTTGCAGGATTGTGTCAATATTGCAGATTTACAGACTGTTCCGCTAGCCCTTGGTGTAGATGTCGCAATATTATAG 921 0.4224 MNHKASVSKELNDKFSKILEGLLKLPENKECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPEQVSFMQFMGNEKSNEYWEAELPRNFDRIGFGLEKFICSKYVEKRWAKIGGVSPASKAGEIICNLNLNVPPPGPKGGFSRANRRLSLEESILRSHMEQIVPPVTRHRGGSLDIPKSTTITPGRRQCPSVDFDKSPINNMNADFFSMFGVHGDKKDSVTVPPTSWTTFDCKTMILASYFIFYHLSYFLIFSSIPPVLNIRSRYLWLQDCVNIADLQTVPLALGVDVAIL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2491 306 Gene3D Arf GTPase activating protein 1 128 IPR038508 -
Alju01g2491 306 SMART arf_gap_3 13 132 IPR001164 GO:0005096
Alju01g2491 306 FunFam stromal membrane-associated protein 1 isoform X1 1 129 - -
Alju01g2491 306 Pfam Putative GTPase activating protein for Arf 17 126 IPR001164 GO:0005096
Alju01g2491 306 SUPERFAMILY ArfGap/RecO-like zinc finger 16 125 IPR037278 -
Alju01g2491 306 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 124 IPR001164 GO:0005096
Alju01g2491 306 CDD ArfGap 19 119 - -
Alju01g2491 306 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 187 IPR044520 GO:0005096
Alju01g2491 306 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Alju01g2491 306 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Alju01g2491 306 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2491 Alju-ChrAlju01 23348495 23353058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2491 2 126 C2H2 Transcription Factor Family AT4G05330 41.221 7.71e-25 100