Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2486 ATGGATTCCGGCGCCTGTGTTTCTTCTGGCAAGTTTGAGAACGATGATGCTAATGTTGTGGAGAAGGATCCTACCGGACGTTACATTCGGTATGATGATATGTTGGGCAGAGGAGCATTCAAGACTGTATATAAGGCATTTGATGAAGTTGATGGGATGGAAGTCGCCTGGTGCAAAGTGGATATTATGCACGTTTTGCAGTCTCCAGTTAAATTGGAAATGTTATATTCTGAGGTCCATCTCCTAAAGTCACTGCAACATGAAAAAATCCTCAAGTGCTATGATTCTTGGGTGGACGATAAAACCAAGACTATCAACATGATAACTGAGTTATTCGTCTCTGGGAGTTTGGGGCGATATCGAAGAATGCATAAGAATGTTGAATTGAAGGCCATCAAGAACTGGGCAAGGCAAATTCTTCAGGGATTATGCTATTTGCACAGCCACAATCCTCCTATCGTCCATAGAGATTTGAAGTGTGATAATATTTTTATTAATGGTAATACTGGAGAAATTAAGATTGGAGATCTTGGATTGGCAACTGTCCTACAGCAACCTACTGCACATTCTGTCATTGGAACACCAGAATTCATGGCTCCTGAGCTTTATGATGAAGAGTATAATGAACTTGTTGACATGTATTCTTTTGGTATGTGCATGTTAGAAATGATAACCTGTGAGTACCCATACAGCGAATGCAAAAATCATGCACAGATATATAAGAAAGTTACCAAGGGAATAAAGCCTGCTGCTCTTGGTAAAGTGAGTGATCCCCAAGTGAGGCAATTCATAGAGAAATGTTTGGTTCCTGCATCTATGAGATTGCCTGCATCTGAGCTATTGAAGGATCCATTTCTCGCCACTGACAATATGAAGGAGGTCAACCATGAACCGCAGTTGCCCATTCACGTGACACGGCCAACAACTGAGCAACGTCCTTTGGAGATAGGCCAACCTGTCAAGGATGTTTTGCCTTTGAAAGTTACTGAAGAAACCCCTCAAATATTAACTCTAGATCTCCCTAGGACGAATGAGGGTACTGAATTCAGGCTACGAGGGGAGAAAAATGCTTCAGACAGAACAATTTCACTAACTCTGCGCATTGCCAAGGCTAATGGTCCTACGACGAAAATCGAGTTTCCATTTTATCTTGATTCTGATACGGCAATTTCAATTGCTGAGGAGATGGTAGAAAGTCTGAATCTCCCTGCTGAGGACGAGAGTGTTATTGCTGAACTGATACACACAATGATTGTGAGGCTTGTTCCTCACTGGAGATCATCTGTAGCAGATTGTTTGGATGGCAATTCTCATTTAGTTGTAAATGGGGGATCACCTGGTGATGAGGATCCTGTTAACCCACTGGTTCTTGAGGAAGATCGAGAGAAGCTTGAATCAATCATGGATGCTAAATCTAATAATGTGCTCTTTGATGGAGTCTCTGAGGGCTCCGTTGCCAAAAGTTCCAATTCAGACTTCTGGTTATCTGATCAAGATGAAGACAAAGTTCAATGTGACCAGCTGCCACCAGAGCTTGATGCAATAGACAACACAAGAACGAGATGTTGTTTTCTCCCATTATTCTCTTTTTCCCTTACATTTTCCCCCATTAGTGGAGGTCAATTGATTTTGGTTCCTTCGAATCAGGCCTTGTATTATTTCATTTTGTCAATGTCAATACATTGGAATATGATTACAGTTTTTCATTTCTCAATAATATGTATTTTTCGCACAAGGTTTTGGAGAGGAGGTGACATATCACATATGGTCCTGTTAAGGGAGGCGTAA 1788 0.4133 MDSGACVSSGKFENDDANVVEKDPTGRYIRYDDMLGRGAFKTVYKAFDEVDGMEVAWCKVDIMHVLQSPVKLEMLYSEVHLLKSLQHEKILKCYDSWVDDKTKTINMITELFVSGSLGRYRRMHKNVELKAIKNWARQILQGLCYLHSHNPPIVHRDLKCDNIFINGNTGEIKIGDLGLATVLQQPTAHSVIGTPEFMAPELYDEEYNELVDMYSFGMCMLEMITCEYPYSECKNHAQIYKKVTKGIKPAALGKVSDPQVRQFIEKCLVPASMRLPASELLKDPFLATDNMKEVNHEPQLPIHVTRPTTEQRPLEIGQPVKDVLPLKVTEETPQILTLDLPRTNEGTEFRLRGEKNASDRTISLTLRIAKANGPTTKIEFPFYLDSDTAISIAEEMVESLNLPAEDESVIAELIHTMIVRLVPHWRSSVADCLDGNSHLVVNGGSPGDEDPVNPLVLEEDREKLESIMDAKSNNVLFDGVSEGSVAKSSNSDFWLSDQDEDKVQCDQLPPELDAIDNTRTRCCFLPLFSFSLTFSPISGGQLILVPSNQALYYFILSMSIHWNMITVFHFSIICIFRTRFWRGGDISHMVLLREA 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2486 595 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 364 418 IPR024678 GO:0004674|GO:0005524
Alju01g2486 595 FunFam Probable serine/threonine-protein kinase WNK1 14 110 - -
Alju01g2486 595 ProSiteProfiles Protein kinase domain profile. 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2486 595 CDD STKc_WNK 27 286 - -
Alju01g2486 595 Pfam Protein kinase domain 33 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2486 595 SMART serkin_6 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g2486 595 Gene3D - 360 438 - -
Alju01g2486 595 SUPERFAMILY Protein kinase-like (PK-like) 31 318 IPR011009 -
Alju01g2486 595 Gene3D Phosphorylase Kinase; domain 1 13 110 - -
Alju01g2486 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Alju01g2486 595 Gene3D Transferase(Phosphotransferase) domain 1 112 294 - -
Alju01g2486 595 FunFam probable serine/threonine-protein kinase WNK9 112 291 - -
Alju01g2486 595 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2486 Alju-ChrAlju01 23298404 23301827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2486 15 428 MAP Kinase Kinase Kinase AT5G41990 63.309 1.31e-176 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Alju01g2486 Pkinase 4.5e-50 CL0016