Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2483 ATGCCTGAGGCCAGTTCTGTTTCACAACTGCCTGAGATAACCCAGTTGGAACAGCAAACTAAGCAATTAACTATTCATCCAGAAGCTTCTTCTGGCCCGCCTGCCTCAAGTAAATCAGTGAGGTTTCCCCTTCGGCCTGGAAAGGGTAGCTATGGCACAAAGTGTATTGTCAAAGCTAATCACTTCTTTGCTGAGTTACCTAACAAAGATCTCCACCAGTATGATGTAACCATAACTCCAGAAGTGCCATCCAGAGGTGTAAACCGTGCTGTTATGGAGCAGCTGGTTAGGCTGTACCGTGAGTCTCATCTAGGCATGAGACTACCTGCATATGATGGTCGCAAGAGCCTGTACACTGCTGGCCCTCTTCCTTTTGTTTCAAATGAGTTCAGAATCACTCTCATTGATGAAGAGGAAGGAGCAGGAGCGGGAGTTCAAAGGAGAGTGAGGGATTTCAAAGTTGTGATAAAATTAGCTGCCCGAGCTGACCTTCACCACTTAGGAATGTTTTTGCAAGGAAGACAGACAGATGCACCTCAGGAAGCCCTTCAGGTTCTTGATATTGTTCTGCGTGAACTACCAACCACTAGGTATTGTCCTGTCGGAAGGTCTTTCTATTCACCTGATATAGGTAGGAGGCAACCATTAGGTGAGGGTTTGGAGAGCTGGCGTGGGTTTTACCAGAGTATTCGTCCAACTCAGATGGGATTATCACTCAACATTGATATGTCATCAACGGCGTTTATAGAACCACTGCCGGTAATTGATTTTGTGACTCAGCTGCTGAACAGGGATGTCACCTCCCGTCCATTGTCTGATGCTGATCGTGTAAAGATCAAAAAAGCACTTCGTGGTGTCAAAGTTGAAGTAACGCATCGCGGTAACATGAGAAGGAAATATCGCATCTCTGGCCTGACATCACAGGCAACTAGAGAGCTGACATTCCCTGTTGACGAGAGGGGGACTGTGAAATCTGTTGTGGAGTACTTTTATGAGACATACGGATTTGTCATTCAACATACTCAGTGGCCTTGCTTACAAGTGGGAAATACTAATAGACCGAACTATCTACCAATGGAGGTTTGCAAGATTGTAGAAGGTCAAAGGTACTCTAAGAGGTTGAATGAGAGGCAGATTACTGCTTTGCTTAAAGTCACCTGTCAGCGACCTGTTGATAGGGAGCGGGATATCATGCAGACGGTTCATCATAATGCTTACCGTGAAGATCCTTATGCTAGAGAGTTTGGGATCAAAATCAGTGAGAAACTTGCTCAAGTTGAAGCACGCATTCTTCCTCCACCTTGGCTGAAGTATCATGATACAGGAAGAGAAAAGGATTGCCTTCCTCAAGTTGGCCAATGGAATATGATGAATAAGAAAATGGTCAATGGGGGGACTGTAAACTACTGGATCTGCATAAATTTTTCAAGGAATGTTCAAGAGAGTGTGGCCAGTGGCTTTTGTTATGAACTTGCACAGATGTGTTATATATCTGGCATGGCATTTAATCCAGAGCCAGTACTTCCTGTGTTCACTGCCCGCCATGACCATGTTGATAAGGTGTTGAAATCACGCTATCATGATGCCAAGGCAAAACTAAAGGATAAGGAGCTTGATCTGCTTATTGTTATTTTGCCTGATAATAATGGCTCTCTTTATGGTGATCTGAAACGTATTTGTGAAACGGATCTTGGGGTTGTTTCCCAGTGCTGTTTGACAAAACATGTATTTAAAATGAACAAGCAGTACCTTGCAAATGTTGCATTAAAAATCAACGTGAAGGTTGGTGGAAGGAACACAGTGCTTGTTGATGCACTTTCAAGACGCATACCTTTAGTTAGCGACCGACCCACAATTATATTTGGAGCTGATGTTACTCATCCACACCCTGGGGAGGATTCTAGCCCATCTATAGCAGCTGTTGTGGCTTCTCAAGATTGGCCTGAAATTACCAAGTATTCTGGTTTGGTTTGTGCTCAAGCGCACAGGCAGGAGCTTATCCAAGACCTTTTCAAACAGTGGCAAGATCCTGCGAGGGGGACAGTAACTGGTGGAATGATAAAGGAGCTTCTCATATCTTTTCGAAGAGCCACAGGGCAGAAGCCACAACGCATAATATTTTACAGGGATGGTGTGAGTGAAGGGCAGTTTTATCAAGTTTTACTTTTTGAGCTTGATGCTATCCGCAAGGCATGTGCATCATTAGAACCTAACTATCAGCCTCCTGTCACTTTTGTGGTGGTTCAAAAGCGTCATCACACGAGGCTGTTTGCTGACAACCATCGTGATCGGAATTCGGTTGACCGTAGTGGGAACATATTGCCTGGTACCGTTGTGGACTCAAAAATTTGTCATCCAACTGAGTTTGACTTCTATCTTTGTAGCCATGCTGGGATACAGGGTACGAGTCGACCTGCCCATTACCACGTGTTGTGGGATGAAAACAATTTTACTGCTGATGCACTTCAGACACTGACTAATAACCTCTGCTACACTTATGCAAGATGCACACGATCGGTTTCAATTGTGCCTCCTGCATACTATGCGCATTTGGCTGCTTTCCGAGCTCGATTTTATATGGAACCGGCCACATCGGATAGCGAGTCAATGAGTGCTGCTGCTGGACGTGGAGCGGGTGTTGGTGCAGGACGCAGCACTCGTGCACCGGGTGCAAATGCTGCGGTCAGGCCTCTTCCTGCTCTTAAAGAGAATGTGAAGAGGGTCATGTTTTATTGTTAA 2739 0.4513 MPEASSVSQLPEITQLEQQTKQLTIHPEASSGPPASSKSVRFPLRPGKGSYGTKCIVKANHFFAELPNKDLHQYDVTITPEVPSRGVNRAVMEQLVRLYRESHLGMRLPAYDGRKSLYTAGPLPFVSNEFRITLIDEEEGAGAGVQRRVRDFKVVIKLAARADLHHLGMFLQGRQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDIGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVTSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTVKSVVEYFYETYGFVIQHTQWPCLQVGNTNRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVDRERDIMQTVHHNAYREDPYAREFGIKISEKLAQVEARILPPPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNYWICINFSRNVQESVASGFCYELAQMCYISGMAFNPEPVLPVFTARHDHVDKVLKSRYHDAKAKLKDKELDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVFKMNKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYSGLVCAQAHRQELIQDLFKQWQDPARGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFADNHRDRNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPATSDSESMSAAAGRGAGVGAGRSTRAPGANAAVRPLPALKENVKRVMFYC 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2483 912 MobiDBLite consensus disorder prediction 1 37 - -
Alju01g2483 912 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 38 862 - -
Alju01g2483 912 SMART DUF1785_2 199 251 IPR014811 -
Alju01g2483 912 CDD Piwi_ago-like 410 860 IPR045246 -
Alju01g2483 912 SMART Piwi_a_2 540 861 IPR003165 GO:0003676
Alju01g2483 912 MobiDBLite consensus disorder prediction 1 44 - -
Alju01g2483 912 Pfam Argonaute linker 2 domain 392 438 IPR032472 -
Alju01g2483 912 Pfam Argonaute linker 1 domain 200 250 IPR014811 -
Alju01g2483 912 CDD PAZ_argonaute_like 251 365 - -
Alju01g2483 912 Gene3D - 430 603 - -
Alju01g2483 912 SUPERFAMILY Ribonuclease H-like 526 862 IPR012337 -
Alju01g2483 912 Pfam N-terminal domain of argonaute 54 190 IPR032474 -
Alju01g2483 912 SUPERFAMILY PAZ domain 56 402 IPR036085 GO:0005515
Alju01g2483 912 Gene3D - 609 912 IPR036397 GO:0003676
Alju01g2483 912 ProSiteProfiles Piwi domain profile. 540 861 IPR003165 GO:0003676
Alju01g2483 912 FunFam protein argonaute 10-like 609 912 - -
Alju01g2483 912 SMART PAZ_2_a_3 256 388 IPR003100 GO:0005515
Alju01g2483 912 Gene3D paz domain 245 370 - -
Alju01g2483 912 FunFam Argonaute 10 430 603 - -
Alju01g2483 912 Pfam PAZ domain 256 381 IPR003100 GO:0005515
Alju01g2483 912 Pfam Mid domain of argonaute 449 524 IPR032473 -
Alju01g2483 912 Pfam Piwi domain 541 860 IPR003165 GO:0003676
Alju01g2483 912 ProSiteProfiles PAZ domain profile. 252 366 IPR003100 GO:0005515
Alju01g2483 912 FunFam Protein argonaute-2 245 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2483 Alju-ChrAlju01 23259370 23264908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2483 2 912 Eukaryotic Initiation Factors Gene Family AT1G48410 83.388 0.0 1587