Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2469 ATGCCATGTCCGATTCCCTGCCCTTTTTTCCTTCTTCTGTCCACACTGGTCTTGTGGGACTCTTCAAAGTCTTCTCCCTTCAGTCAGCCCCCTCAGCCCCGTTCTGTGTGTTCTTTACTTCGCTTCTTCTCCTGCTTACTTCCCTCCTCCCGCAGATTTCTCTATCTTCAGCAGAATTTCGTTTCTTCCTTGACTTTGAATGGGGAGATTCTGGCACTGTCAGCTGTTGGTGAAGTTTTGAGGCTGTATTGTCGGAAATTCAGCTTCATTACAGTACTGTATTTGTTCGCCCTGAAACGCATACATAGAAGCAGTTCAAAGAACTGTGAAGATTTATCAGCAGAACCTCTTAAGCAGAACAGTTGGAAAATGAGAACACAAAGATTAGATTTTAGGACTTCGGAGTCAGATAATTTCTTGGGAAAGATGGCGGATTTGGAAAAAGATGAGATGCCAATGCTGTTGGAGACAGAGCAACCATCAGTTGAATTGGTGGAGTCTAAATTACAGAGGCTTATATCCAGGACACGAAGTGCTTCATTATCTATTCCTATGAGCTCCATGGAGCCATATGAGAGAGAAACTAATCTTGTGGGACATACTGGTCCACTAAGGAGTGAGAGGAAAACCCCCTTTGTGCAGATGAGTGGTCCACTATATGTCACCAACAGACATGGAAATCTTTCCCGACAGAACGTCAATGCCACAGGGAACAAAGCAGTGGAGAGCATGACGGAAAAAATTGCTTTGCATGGAAGAGTTGATAATGATTGGCAGAACAACTATGCCCACAAAAATGAACACTTACTGAGGTCTGGGCAATTGGGAATGTGTAATGATCCTTATTGTACAACTTGCCCTACTTACTTCAAGACCTATCAGCAAAGGAATCCTAAGGCTTCTGGTTTATTTGATCCCAAGTTCCACAATGCTCTCTATGGAGATGCTAAGGGTTGCGCAAGAAGATTTATTTCTTTTCTGACTTCATATGTCCCTGGAGTTATGAATCCTCATACTAAAGTTGTACAGCAATGGAACAAATTTTTCGCCATTTCTTGCATAGTGGCCATTTTTGTGGATCCATTATTTTTCTTCTTGCTCGGTGTAAAAGAGAAGGAAAGATGTATTTTCATCGACTGGAAGTTGACATGGGCACTTGTTTGTGTTAGATCCATAAATGATGTTGTATACTTCCTAAACATGCTTCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGACTCTAGGGTGGTTGGTGCTGGCGATTTAGTTGACCATCCAAAAAAAATTGCTCTCCATTATTTGAAGAGTTATTTTCTTATGGACTTATTTGTTGTGTTTCCACTTCCTCAGATAATGATATTGTTTGCCCTACCATATCACTTGGGTTCGTCTGGAGCAAATTATGCTAAGAATCTTCTACGTCTAGCACTCCTTGTTCAGTATATTCCCAGATTGTGCAGGTTTCTCCCTCTTCTAATTGGTCAGTCTCCAAGTGGGTTGATGATATTTGAGTCAGCATGGGCAAATTTCTTTATAAATCTTCTCACCTTTGTGCTATCTGGCCATGTTGTTGGGTCTTGTTGGTATCTCTTTGGTCTACAGAGGGTCAACCAATGTCTTCGAAATGCCTGTCATAGGGAGAATTTTCATCACTGCATGGAATTGATTGATTGTGGGCATGGCCATTCAGAAACCTTTCGGTCTTTTCTTTTGCTCAACGAAGCCAATCAGTTTAATCAAACTTGGTTAAACAGTAGTGGTGCAGGCAATTGTTTCAATATCTCAGACGAAGGTTTTGATTATGGGATCTATCAAAAAGCTGTTGACCTTGTTGCAGAACCAAGTGTGATTACGAGATATGTGTATTCATTATTTTGGGGATTCCAGCAAATTAGTACTCTGGCTGGGAATCAAACCCCAAGCTATTTTATCTGGGAAGTCCTTTTTACAATGGGTATCATAGGACTGGGACTCTTGCTTTTTGCTCTTCTCATTGGAAATATACAGAACTTTCTTCTGGCTCTTGGACGGAGGAAGCTAGAAATGTCACTTAGACGTCGTGATGTGGAGCAATGGATGAGCCACCGGCGTTTGCCAGACGATTTAAGAAGGAGAGTAATACTGGCTGAACGATATAATTGGGCTGCAACCAGAGGCGTAAATGAAGAAATGCTTCTGGAGAGTCTGCCAGAGGATCTTCAAAGAGACATTAGACGTCATCTCTTCAAATTTGTTAAGAAAGTTCGAATTTTTGCCCTGATGGATGAACCTATCTTAGATGCCATTTGTGAGAGACTAAGACAAAAAACATACATCAAAGGAAGCAATATTCTGTATCATGGTGGTCTGGTAGACAAAATGGTGTTTGTTGTGCGTGGAAGATTGGAGAGCATTGGAGATGATGGGATCCGGGTTCCCTTAGTTGAAGGGGATGTATGTGGTGAAGAACTCCTGACATGGTGTCTCGAACATTCTTCTGTGAGCAGAGATGGTAAAAAAGTAAAGCTTCCTGGACAAAGATTGCTCAGCAACAGGACTGTATGTTGCTCAACAAATGTGGAGGCATTTTCACTCCGTTACACAGACCTCGAAGAAGTCACTAGCCTTTTTACAAGATTCCTAAGAAATGCGCGGGTTCAAGGAGCCATAAGGTATGAATCGCCATATTGGAGAAGCCTTGCTGCAACTCGTATTCAGGTTGCATGGAGATACAGGAAGAAACGTCTCAGTCGTGCTGATACCTCACAGTCAAATCATTAG 2760 0.4203 MPCPIPCPFFLLLSTLVLWDSSKSSPFSQPPQPRSVCSLLRFFSCLLPSSRRFLYLQQNFVSSLTLNGEILALSAVGEVLRLYCRKFSFITVLYLFALKRIHRSSSKNCEDLSAEPLKQNSWKMRTQRLDFRTSESDNFLGKMADLEKDEMPMLLETEQPSVELVESKLQRLISRTRSASLSIPMSSMEPYERETNLVGHTGPLRSERKTPFVQMSGPLYVTNRHGNLSRQNVNATGNKAVESMTEKIALHGRVDNDWQNNYAHKNEHLLRSGQLGMCNDPYCTTCPTYFKTYQQRNPKASGLFDPKFHNALYGDAKGCARRFISFLTSYVPGVMNPHTKVVQQWNKFFAISCIVAIFVDPLFFFLLGVKEKERCIFIDWKLTWALVCVRSINDVVYFLNMLLQFRLAYVAPDSRVVGAGDLVDHPKKIALHYLKSYFLMDLFVVFPLPQIMILFALPYHLGSSGANYAKNLLRLALLVQYIPRLCRFLPLLIGQSPSGLMIFESAWANFFINLLTFVLSGHVVGSCWYLFGLQRVNQCLRNACHRENFHHCMELIDCGHGHSETFRSFLLLNEANQFNQTWLNSSGAGNCFNISDEGFDYGIYQKAVDLVAEPSVITRYVYSLFWGFQQISTLAGNQTPSYFIWEVLFTMGIIGLGLLLFALLIGNIQNFLLALGRRKLEMSLRRRDVEQWMSHRRLPDDLRRRVILAERYNWAATRGVNEEMLLESLPEDLQRDIRRHLFKFVKKVRIFALMDEPILDAICERLRQKTYIKGSNILYHGGLVDKMVFVVRGRLESIGDDGIRVPLVEGDVCGEELLTWCLEHSSVSRDGKKVKLPGQRLLSNRTVCCSTNVEAFSLRYTDLEEVTSLFTRFLRNARVQGAIRYESPYWRSLAATRIQVAWRYRKKRLSRADTSQSNH 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2469 919 Gene3D Jelly Rolls 748 872 IPR014710 -
Alju01g2469 919 CDD CAP_ED 750 866 IPR000595 -
Alju01g2469 919 ProSiteProfiles cAMP/cGMP binding motif profile. 750 818 IPR000595 -
Alju01g2469 919 Gene3D Helix hairpin bin 678 742 - -
Alju01g2469 919 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 278 913 - -
Alju01g2469 919 Pfam Ion transport protein 345 670 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Alju01g2469 919 SUPERFAMILY cAMP-binding domain-like 678 874 IPR018490 -
Alju01g2469 919 Gene3D - 334 673 - -
Alju01g2469 919 SUPERFAMILY Voltage-gated potassium channels 337 672 - -
Alju01g2469 919 SMART cnmp_10 750 885 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2469 Alju-ChrAlju01 23043174 23061325 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2469 147 828 Ion Channels AT3G17700 62.591 0.0 841