Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2442 ATGGACGGAGTAGTAGGAGGAGGAGGAGACCATGGAAACTCTTCGTCGAATTCTATCTACAGAGAGTGTCTGCGAAACCATGCGGCGAGCCTCGGGAGCTACGCCACCGACGGCTGCGGCGAGTTCACCCTGGACGACACATCTCCGGGAGGGTGCCTGCAATGCGCCGCCTGCGGCTGCCACCGCAACTTCCACCGCAAGGTGACATGCCCGCCGCCTCCGAGGCTGACAACGGGGGAGATGATGGAGTACAGCGGCGGAGAGGGGACGCCGCCGCCGAGCGGCGGGGAGATGATGAGGACTACGATGTCGACCGGGACGAATAAGAAGAGATTCAGGACGAAGTTCACGGTGGAGCAGAAAGAGAAGATGATGGGATTCGCGGAGAAGCTAGGGTGGAAGTTGCAGAGGAAGGATCTAGACGATGAGATAGAGAGGTTCTGCAGAGGATTGGGATTGAGCAGACAAGTGTTCAAGGTTTGGATGCATAACCATAAGAACTCTTCTTCTTCCTCTTCTGCTTCTACTGGCAATGCCTCCTCTCTTACCCAGTAA 555 0.5676 MDGVVGGGGDHGNSSSNSIYRECLRNHAASLGSYATDGCGEFTLDDTSPGGCLQCAACGCHRNFHRKVTCPPPPRLTTGEMMEYSGGEGTPPPSGGEMMRTTMSTGTNKKRFRTKFTVEQKEKMMGFAEKLGWKLQRKDLDDEIERFCRGLGLSRQVFKVWMHNHKNSSSSSSASTGNASSLTQ 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2442 184 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 17 168 - -
Alju01g2442 184 SUPERFAMILY Homeodomain-like 97 167 IPR009057 -
Alju01g2442 184 Gene3D - 94 173 - -
Alju01g2442 184 Pfam ZF-HD protein dimerisation region 19 69 IPR006456 -
Alju01g2442 184 FunFam Zinc-finger homeodomain protein 2 97 171 - -
Alju01g2442 184 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 20 68 IPR006456 -
Alju01g2442 184 MobiDBLite consensus disorder prediction 79 107 - -
Alju01g2442 184 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 20 67 IPR006456 -
Alju01g2442 184 NCBIfam homeobox domain, ZF-HD class 109 167 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2442 Alju-ChrAlju01 22617098 22617652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2442 20 168 ZF-HD Transcription Factor Family AT4G24660 46.552 2.42e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Alju01g2442 ZF-HD_dimer 1.6e-22 No_clan