Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2429 ATGCCCCAGAATAAAAATAAGATGATTATTTCCAAACAAGACCCATCATCGAATCCGATGCCTGATCTTTCTCTGCACATAAGCCTCCCAAACAGTGCTCCTTCTTCAATTTGCACTACTGGAAATAATAACAACAACGAAGAGGCAGATTCGTCTTCGTTTGATATTTGGAGAAGCAACACAGAAGAAGTAGACGGTGCCAAATCCCACAGTGAGAGTTCAATCAGAGAACAAACCCATCTTCATCTCTCTCAATCTCTCTTCAATCGTGATCATCATCTTCCCACAAGTGGTGGTTGTGAGGCTGAGAGCCCCTGGAGAAGAAGATTACTAAACGACGTCGTTATTGGAGAAGATGGTACTGGTAATGGTGATGGTGGGTTTTGGGTTTCAGAGGGAGGACTCAATAATTCATCAAGAGCAGTAAGAGGAATCCCACCTCAAGATTGCAATAATATTTCCGTATACCCAATTCAACAATTCCCCTATTATCCCAGTTACTCATCATCACCGTCTTCTACTTATCATAGTCTTATTGGTGGTGGTGCTGCTAATCATAACCCAGTAATCTCCTCGAGGTTTAATGGGATAAGCATGGAGAGTTTAATAAGTCGACCCCTTCATCAACCCAATCACGAGGCGTTGCACTACTTGAGTCGTCATCATCATCTTCTTCAACAACAACACCATCAGTTTGGTTCATCAAACTCTGATTTCTCAAATGGATTTGGGAGGTCGTCGAAGATGTTGCCTAATAGGCTTCACAGTAATAAGAGGAACATGAGGGCTCCCAGAATGCGTTGGACTAGCTCCCTTCATGCTCGTTTTGTTCACGCCGTTGAGCTCCTAGGCGGCCATGAAAGAGCAACCCCTAAGTCAGTTTTGGAGCTCATGGATGTGAAAGATCTCACACTCGCTCATGTCAAGAGCCATTTGCAGATGTATCGAACTGTTAAGAACACTGACAAACCCGCAGCTTCCTCAGATGGAGATGAAGATTTCATGAGCCTAACACCACCACTGAATGAAAATGAGAACTATTTTTCACCCAACAGGAGAGGCCCTACAAATGCATCATCTTTAGATCAGGATATGGCCTACACTAGCAGCATTCTGTGGGATAATTCTTCTAGTAGACGAGCATGGACACAAGCTAGTTCCACAGATATAGATGGAATCAGACCACGACCTGATAATTTATCATCTTCTCATCACCACATAACTGAGAAACAGTCCGAGGGAAATACTTTTTTGCAATCAAGAAGCTTAAAGGACTCTGAGAATTTAAGCTTGGAGTTTACCCTAGGGAGATCAAACGAACATGCCTAG 1329 0.4319 MPQNKNKMIISKQDPSSNPMPDLSLHISLPNSAPSSICTTGNNNNNEEADSSSFDIWRSNTEEVDGAKSHSESSIREQTHLHLSQSLFNRDHHLPTSGGCEAESPWRRRLLNDVVIGEDGTGNGDGGFWVSEGGLNNSSRAVRGIPPQDCNNISVYPIQQFPYYPSYSSSPSSTYHSLIGGGAANHNPVISSRFNGISMESLISRPLHQPNHEALHYLSRHHHLLQQQHHQFGSSNSDFSNGFGRSSKMLPNRLHSNKRNMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFMSLTPPLNENENYFSPNRRGPTNASSLDQDMAYTSSILWDNSSSRRAWTQASSTDIDGIRPRPDNLSSSHHHITEKQSEGNTFLQSRSLKDSENLSLEFTLGRSNEHA 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2429 442 Gene3D - 263 320 - -
Alju01g2429 442 MobiDBLite consensus disorder prediction 1 52 - -
Alju01g2429 442 MobiDBLite consensus disorder prediction 384 423 - -
Alju01g2429 442 FunFam Myb family transcription factor 262 320 - -
Alju01g2429 442 NCBIfam myb-like DNA-binding domain, SHAQKYF class 264 317 IPR006447 GO:0003677
Alju01g2429 442 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 20 440 IPR044847 GO:0000976|GO:0006355|GO:0010158
Alju01g2429 442 SUPERFAMILY Homeodomain-like 261 318 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2429 Alju-ChrAlju01 22390700 22398724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2429 130 441 G2-like Transcription Factor Family AT5G16560 42.991 4.21e-51 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju01g2429 None None None