Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2417 ATGGATATGGAATCTGAGAGGCTTCACAGTGCCGAGAACAATGAACAAGGTTTAGAAAGGGACGACGTTCTCAAGAGAAGAATCTCTAGCCATCCTCTCTATGAACTTCTTGTTCAAGCTCATTTGCAGTGTTTGAAGGTAGGTGAAATGTCCAACCTGGAGATAGATCAGAAGCTAATAGTGAACAGTCAAAGCTTGGACATGTTCAGTGAACCAGAGCTTGATCTCTTCATGGAAGAATATTGCATGGCATTGGGGAAGCTGAAAGAGGCAATGGAGGAACCACAACAAAAGGTGATGGCTTTCATAAACAACATGCATTCACAACTGAAGGAGCTCAGTGTTAAGAACAACTTGCCTTCTCATCAACCACCTGATGATGCGTCTCATCCCACAACTTCTGCTCACTTCAATAATATTCTTCAAAAAGATGATTGA 438 0.4201 MDMESERLHSAENNEQGLERDDVLKRRISSHPLYELLVQAHLQCLKVGEMSNLEIDQKLIVNSQSLDMFSEPELDLFMEEYCMALGKLKEAMEEPQQKVMAFINNMHSQLKELSVKNNLPSHQPPDDASHPTTSAHFNNILQKDD 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2417 145 Pfam KNOX2 domain 70 113 IPR005541 GO:0003677|GO:0005634
Alju01g2417 145 MobiDBLite consensus disorder prediction 117 139 - -
Alju01g2417 145 MobiDBLite consensus disorder prediction 117 145 - -
Alju01g2417 145 Pfam KNOX1 domain 24 48 IPR005540 GO:0003677|GO:0005634
Alju01g2417 145 Coils Coil 1 21 - -
Alju01g2417 145 SMART KNOX1_2 22 64 IPR005540 GO:0003677|GO:0005634
Alju01g2417 145 SMART KNOX2_2 64 115 IPR005541 GO:0003677|GO:0005634
Alju01g2417 145 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 12 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2417 Alju-ChrAlju01 22209008 22210367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2417 22 113 Homeobox Transcription Factor Family AT4G08150 35.922 9.64e-12 59.7