Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju01g2414 | ATGAGCTTGCAAGACCGAGAGGAAAGAAGGGATCGGTCCAGGGTTCCTGCCCAAGGTTCTCGTCGGGAATGGGTTCCTAGAGCACCTGTGGCTGCCGCCACCGTGAATTTGGCGCCATCAAATTATCCATTGGATCAAAATGTTAATGCTGGTTGCTCAGATAATAATGTCGTTCCACCAGGAAATCGGCATAGAAGCAGTCATGGGTCAAGGGGTCACACAAGTCGGCCTGTGAATCAGAGAAGGGAAAGGGAAAAGGGGAGGAATGAGAATCAGGTGGTGCAAAGAGCGAGGGACTCTGATTTGCCTCAATTGTTGCAAGAGATCCAGGATAAACTTGTGAAAAGTACTGTAGAATGCATGATCTGTTATGACACGGTCCGCAGAACTGCGCCCATCTGGTCTTGTTCAAGCTGCTACTCTATCTTTCACCTGAATTGTATAAAAAAGTGGGCTCGAGCACCTACTTCTGTTGATGTGTCTGCAGAAAAGAATCAAGGATTTAATTGGCGGTGTCCTGGTTGTCAATCTGTACAGCTGACGTCATCATGGGAGATTAGGTATGTATGCTTTTGTGGAAAGAGGCCAGACCCACCATCTGACCTGTATCTCACACCACATTCTTGTGGAGAACCATGTGGTAAGCCTCTTGAGAAGGAGGTGTTGGTTAATGGAGGGAGGGTGAGCAAGGAAGATCTTTGCCCTCATGTTTGTGTTTTGCAATGCCATCCTGGTCCATGCCCTCCATGTAAAGCATTTGCACCGCCACGTTTGTGTCCTTGTGGGAAGAAAACTATTACCACACGGTGCTCTGATCGGTCCCCTGTTCTTACCTGCGGTCAAGTTTGTGATAAGCTTCTCGAGTGTGGGCGTCATAGGTGTGGACGCATTTGCCATGTGGGTCTGTGTGACCCATGTCATGTTCTAATCAATGCCTCTTGTTTCTGCAACAAGAAGGCGGAGGTTATTCTTTGTGGGGACATGGCTGTGAAGGGAGAAATTAAAGTTGCAGGTGGTGTATTTTCTTGTGGTTCCAAGTGTGGGAAGAAACTTAGTTGCGGTAATCATGTCTGCAATGAGATGTGTCATCCAGGTAACTGTGGGGAGTGTGAATTCTTACCAAGCCGGATTAAGACATGCTGTTGTGGGAAAACAAAATTGGAGGAGGAACGGCATAGTTGTCTAGATCCAGTACCAACCTGTTCGCAAGTATGTGACAAGCCTCTTCCTTGTGGTTTGCATCATTGTAGAGAGACATGTCATTCTGGGGATTGTTCACCATGTTCGCTTCTAGTCTCCCAAAAGTGTCGATGTGGTTCAACTTCTCGAACTGTGGAGTGCTATAGGGCAATGAAGGAGGATGAGTCATTTACTTGTGAAAGATCTTGTGGGTGGAAAAAAAACTGTGGAAAACATCGATGTAGTGAGCGTTGTTGTCCACTTTCTAATCCAAATAATCGTCCAAATGGGGAGTGGGATCCTCACTTCTGTACCATGCCGTGTGGAAAGAAGCTAAGGTGCGGGCAACATGCATGCGAATCACTATGTCACAGTGGCCATTGTCCACCTTGTCTTGAAACTATCTTCACCGATTTGACATGTGCTTGCGGTAGGACTTCAATCCCTCCTCCATTGCCTTGTGGCACACCCCCTCCCTCATGTCAACTTCCGTGTTCAGTTCCTCAACCTTGTGGCCATTCAGCCTCCCACAGCTGCCACTTTGGAGATTGCCCACCTTGTTCGATGCCTGTGGCGAAGGAGTGTATTGGTGGGCATGTGGTTCTTCGGAATATACCTTGTGGATCAAAGGATATTAGATGTAACAAACTCTGTGGGAAGACCAGACAGTGTGGCTTACATGCTTGTGGAAGAACATGTCACCCTCCACCTTGTGATGTTCGATCTAGTAGTGACCAAGGTCTCAGAACTTCTTGTGGTCAAATATGTGGTGCCCCTAGGAGGGACTGCAGGCATACATGTACAGCTGCATGTCACCCTTCGGCACCATGCCCTGACATAAGATGCGAGTTCTCTGTTACAATTACTTGTTCTTGTGGCCGTATAACAGCAAATGTTCCTTGTGGTGGTGGTGGTGGTGGTGGTAATTATAATTCTGATTCGATACATGAAGTTTCCATAATTCAAAAGTTGCCTGTGCCACTTCAACCTGTGGAAAACAGCAAATTGATTCCCCTTGGACAAAGAAAGCTGACGTGTGATGATGAATGTGCTAAGTTGGAGCGTAAGAAGGTTCTTGCTGATGCTTTTGATGTCACCACTCCAAACCTGGATTCTCTTCATTTTGGTGAGAACCCCACTACTACTGAATTGCTTTCAGACATGTTTAGGCGTGATCCTAAGTGGGTTTTGTCTGTGGAGGAGAGATGCAAATATTTAGTTCTCGGCAAGAGCAAAGGAGTAACACATGGTTTGAAAGTCCATGTTTTCTGTCCTATGCTGAAGGATAAGAGAGATGCAGTGAGGGTTATTGCTGAGAGATGGAAGTTGGCAGTGAATGCTGCTGGTTGGGAGCCAAAGCGTTTTGTCACAGTTCATGTTACTCCGAAGTCAAAGGCTCCTCCCCGGGTGCTTGGAATTAAGGGCACTCCAGTGGGAAATGCAGCCTTGCCTCCACAATTTGATCCTTTGGTAGATATGGATCCCCGTCTTGTTGTCTCCTTTCCAGACTTACCAAGAGAAGCCGATATAAGTGCTTTAGTACTGAGGTTTGGCGGTGAATGTGAACTTGTATGGTTGAATGATAAAAATGCATTGGCTGTTTTCCATGATCCTAACCGAGCTGCGACTGCGATGAGGAGGTTGGATCATGGAACAGCTTATCACGGGGCTGTGGTGGTTGTTCCAAATGCCGGGGCATCAGCAACATCATCGGCGGCTACCAATGCATGGGGAGGAGCTGGGACGTTGAAAGAAGGAGGAGCACTGGCAGGATTGAAGGGCAATCCATGGAAAAAGGCTGTGGTTCAAGAGCCTGGCTGGAGAGAAGATTCTTGGGGTGATGAAGAGTGGACTACTGGTTCTGCTAATGTCCAGACTTCTGCCTGGACGAGAGAAACACCTAAAGTCCCGATCACTACTTCGTTGAATCGGTGGAGTGTCTTAGACCATGAATCATCTTCAAGATCAGCTGCTGCTACCATTAGAACTGAAGCTTCTCGGAAACACTCGGCAAGTTCCTCTTCTGCCCCAAAGCTGGAATCTAAGTCTGGTGGTTCTGTTTCAGGACAGCTTCAAGAAAAAGCTAATGCAACAGAAGCTTCTGAAGTAGTAGATGATTGGGAGGAAGCTTATGAATGA | 3318 | 0.4714 | MSLQDREERRDRSRVPAQGSRREWVPRAPVAAATVNLAPSNYPLDQNVNAGCSDNNVVPPGNRHRSSHGSRGHTSRPVNQRREREKGRNENQVVQRARDSDLPQLLQEIQDKLVKSTVECMICYDTVRRTAPIWSCSSCYSIFHLNCIKKWARAPTSVDVSAEKNQGFNWRCPGCQSVQLTSSWEIRYVCFCGKRPDPPSDLYLTPHSCGEPCGKPLEKEVLVNGGRVSKEDLCPHVCVLQCHPGPCPPCKAFAPPRLCPCGKKTITTRCSDRSPVLTCGQVCDKLLECGRHRCGRICHVGLCDPCHVLINASCFCNKKAEVILCGDMAVKGEIKVAGGVFSCGSKCGKKLSCGNHVCNEMCHPGNCGECEFLPSRIKTCCCGKTKLEEERHSCLDPVPTCSQVCDKPLPCGLHHCRETCHSGDCSPCSLLVSQKCRCGSTSRTVECYRAMKEDESFTCERSCGWKKNCGKHRCSERCCPLSNPNNRPNGEWDPHFCTMPCGKKLRCGQHACESLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPPPSCQLPCSVPQPCGHSASHSCHFGDCPPCSMPVAKECIGGHVVLRNIPCGSKDIRCNKLCGKTRQCGLHACGRTCHPPPCDVRSSSDQGLRTSCGQICGAPRRDCRHTCTAACHPSAPCPDIRCEFSVTITCSCGRITANVPCGGGGGGGNYNSDSIHEVSIIQKLPVPLQPVENSKLIPLGQRKLTCDDECAKLERKKVLADAFDVTTPNLDSLHFGENPTTTELLSDMFRRDPKWVLSVEERCKYLVLGKSKGVTHGLKVHVFCPMLKDKRDAVRVIAERWKLAVNAAGWEPKRFVTVHVTPKSKAPPRVLGIKGTPVGNAALPPQFDPLVDMDPRLVVSFPDLPREADISALVLRFGGECELVWLNDKNALAVFHDPNRAATAMRRLDHGTAYHGAVVVVPNAGASATSSAATNAWGGAGTLKEGGALAGLKGNPWKKAVVQEPGWREDSWGDEEWTTGSANVQTSAWTRETPKVPITTSLNRWSVLDHESSSRSAAATIRTEASRKHSASSSSAPKLESKSGGSVSGQLQEKANATEASEVVDDWEEAYE | 1105 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju01g2414 | 1105 | CDD | NF-X1-zinc-finger | 343 | 388 | - | - | |
| Alju01g2414 | 1105 | SUPERFAMILY | RING/U-box | 110 | 179 | - | - | |
| Alju01g2414 | 1105 | CDD | NF-X1-zinc-finger | 497 | 540 | - | - | |
| Alju01g2414 | 1105 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Alju01g2414 | 1105 | Pfam | NF-X1 type zinc finger | 617 | 632 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | Pfam | NF-X1 type zinc finger | 236 | 251 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | Pfam | NF-X1 type zinc finger | 649 | 674 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | Pfam | NF-X1 type zinc finger | 564 | 581 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | Pfam | NF-X1 type zinc finger | 411 | 429 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | Pfam | NF-X1 type zinc finger | 289 | 306 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | Pfam | NF-X1 type zinc finger | 507 | 524 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | Pfam | NF-X1 type zinc finger | 469 | 480 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | Pfam | NF-X1 type zinc finger | 353 | 370 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | MobiDBLite | consensus disorder prediction | 48 | 63 | - | - | |
| Alju01g2414 | 1105 | CDD | NF-X1-zinc-finger | 279 | 327 | - | - | |
| Alju01g2414 | 1105 | SMART | znfxneu3 | 411 | 430 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | SMART | znfxneu3 | 617 | 647 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | SMART | znfxneu3 | 507 | 526 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | SMART | znfxneu3 | 564 | 582 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | SMART | znfxneu3 | 353 | 372 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | SMART | znfxneu3 | 469 | 499 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | SMART | znfxneu3 | 289 | 308 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | SMART | znfxneu3 | 234 | 252 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | SMART | znfxneu3 | 656 | 677 | IPR000967 | GO:0005634|GO:0008270 | |
| Alju01g2414 | 1105 | ProSiteProfiles | Zinc finger PHD-type profile. | 117 | 178 | IPR019787 | - | |
| Alju01g2414 | 1105 | ProSiteProfiles | Zinc finger RING-type profile. | 120 | 176 | IPR001841 | - | |
| Alju01g2414 | 1105 | CDD | NF-X1-zinc-finger | 554 | 602 | - | - | |
| Alju01g2414 | 1105 | MobiDBLite | consensus disorder prediction | 998 | 1020 | - | - | |
| Alju01g2414 | 1105 | MobiDBLite | consensus disorder prediction | 1046 | 1105 | - | - | |
| Alju01g2414 | 1105 | MobiDBLite | consensus disorder prediction | 1046 | 1090 | - | - | |
| Alju01g2414 | 1105 | CDD | NF-X1-zinc-finger | 209 | 272 | - | - | |
| Alju01g2414 | 1105 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 | 70 | 1008 | IPR034078 | GO:0003700 | |
| Alju01g2414 | 1105 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Alju01g2414 | 1105 | CDD | RING-CH-C4HC3_NFX1-like | 119 | 176 | - | - | |
| Alju01g2414 | 1105 | MobiDBLite | consensus disorder prediction | 48 | 99 | - | - | |
| Alju01g2414 | 1105 | CDD | NF-X1-zinc-finger | 401 | 449 | - | - | |
| Alju01g2414 | 1105 | MobiDBLite | consensus disorder prediction | 76 | 95 | - | - |
Transcription factors information