Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g2407 ATGCATTCAATCCATAATCCCTCTTGCTATGCTAACCTCAACTATTCTTTATCCAAGTTCAATAAATTTTCCAACTGTTTGGTTGGATCCAATGTGGCCCTAGCCTCATGCGCACCCCCGGCTGTTCTTAGCTGCGGATTGCGTGCAACGGATTCTGAATTCTTGCCCAAAATTAGTTATTTTCAGAACCCACGTTTTGTTTTCGCACGCAGGAAACCCTGGCGCTGTGTAGTAGCCAGAGCCTCCGGAAATGATTACTATACAACTTTGAAAGTTAGTAACAATGCTTCTTTGCAAGAGATTAAGAGCGCTTACAGAAAACTAGCCCGTAAGTATCATCCAGATATGAACAAGAGCCCCGGGGCAGAAGAGAAATTCAAGGAGATAAGTGCTGCATATGAGGTTCTATCTGATGATGAGAAAAGATCTTTATATGATCGCTTTGGTGAGGCAGGTCTACAAGGAGAAAATGGAGGGTCAGCTACTGCTTCAGGGGTTGATCCTTATGATGTATTTGATGCATTCTTTGGTGGTTCGGATGGTCTATTTGGAGGTGGTGATGAACTAGGAGGAATGAACTTCAATTTCAGAAACAGCAGAAAACGTGGTCTTGATATTCGGTATGACCTTTACTTGAGCTTTGAGGAATCTGTTTTCGGGGGAAGGAAAGAAATCGAAGTTCCTGGTTTTCAGACATGTACTGATTGTGATGGTACAGGAGCTAAGTCAAGGGATTGCATTAAACCATGCGTAAATTGTGGTGGCAGAGGAGGAGAGATGAAAAGTCAAAGAACACCCTTTGGAGTAATGTCTCAGGTTTCAACCTGCTCTAAGTGCCGTGGTCTTGGCAAGATAGTCACTGACAACTGTCAAAGGTGCAGTGGCAGTGGGATGGTGCAGTCTAAACAAACAATGGAAATGGTCATTCCTCCTGGTGTCAATGACGGAGCCACAATTCAAATTCGAGGAGAAGGGTATTTGGATAAGAATAGGGGTACAGCTGGTGACCTTTATATAGTCATCCATGTAGATGAAAAAGATGGAGTTTGGAGGGAAGGTCTTCATTTGTACTCAAAGATTAATATTGACTTCACAGAGGCAATTCTAGGGTCTGTTAAAAAGGTAGAAACTGTTGAGGGTTCAAGGGACCTCCAAATTCCTTCTGGGATTCAACCAGGAGATTCTGTGAAGTTGTCACGTATGGGAGTTCCTGACATGAATAAACCATCTGTTCGAGGTGATCATTACTTCATTGCGAATGTTCTCATCCCTAAAAATATCAGTGTTGCTGAACGTGTACTTGTTGAGGAATTGGCTTCAATCAGAGCATCTGGCAAAGACACCTCAATTTCTTCTAATAACATTGGGACACCTAAAGGGGAAGTAAATGATTTCAAAAAGAGGCACGCAAAACGTCATTCAAGCATGGGAAGTAAACATGGTTCTCTATGGAGATCAATCAAGAATTTCTTAAGAAGAGGACAATCTGAAGAGAAGTTTGCATCCATGAGCGTGGATTCCTCATCAGCATTGTGGAGATTTGGCAAGTCAAACTCATTAAACCCTAGTCATTTTTTATTTGGTTTCATTATAAGCTGTATTATGCTGTGTATATCTAGGTCGTATTACACTTTGTTCCATAAACAAACCCTGCCCTCTACTCGTAGAACACCTAGTGAAAGGACATTAACAGGGAGAGATTTTTCTGTTTGA 1713 0.418 MHSIHNPSCYANLNYSLSKFNKFSNCLVGSNVALASCAPPAVLSCGLRATDSEFLPKISYFQNPRFVFARRKPWRCVVARASGNDYYTTLKVSNNASLQEIKSAYRKLARKYHPDMNKSPGAEEKFKEISAAYEVLSDDEKRSLYDRFGEAGLQGENGGSATASGVDPYDVFDAFFGGSDGLFGGGDELGGMNFNFRNSRKRGLDIRYDLYLSFEESVFGGRKEIEVPGFQTCTDCDGTGAKSRDCIKPCVNCGGRGGEMKSQRTPFGVMSQVSTCSKCRGLGKIVTDNCQRCSGSGMVQSKQTMEMVIPPGVNDGATIQIRGEGYLDKNRGTAGDLYIVIHVDEKDGVWREGLHLYSKINIDFTEAILGSVKKVETVEGSRDLQIPSGIQPGDSVKLSRMGVPDMNKPSVRGDHYFIANVLIPKNISVAERVLVEELASIRASGKDTSISSNNIGTPKGEVNDFKKRHAKRHSSMGSKHGSLWRSIKNFLRRGQSEEKFASMSVDSSSALWRFGKSNSLNPSHFLFGFIISCIMLCISRSYYTLFHKQTLPSTRRTPSERTLTGRDFSV 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g2407 570 CDD DnaJ 85 138 IPR001623 -
Alju01g2407 570 SUPERFAMILY HSP40/DnaJ peptide-binding domain 200 344 IPR008971 GO:0006457|GO:0051082
Alju01g2407 570 SUPERFAMILY HSP40/DnaJ peptide-binding domain 351 432 IPR008971 GO:0006457|GO:0051082
Alju01g2407 570 Pfam DnaJ central domain 233 297 IPR001305 GO:0031072|GO:0051082
Alju01g2407 570 Gene3D DnaJ domain 82 184 IPR036869 -
Alju01g2407 570 SMART dnaj_3 84 141 IPR001623 -
Alju01g2407 570 Pfam DnaJ domain 85 146 IPR001623 -
Alju01g2407 570 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 49 443 - -
Alju01g2407 570 FunFam Molecular chaperone DnaJ 225 302 - -
Alju01g2407 570 PRINTS DnaJ domain signature 87 105 IPR001623 -
Alju01g2407 570 PRINTS DnaJ domain signature 105 120 IPR001623 -
Alju01g2407 570 PRINTS DnaJ domain signature 141 160 IPR001623 -
Alju01g2407 570 PRINTS DnaJ domain signature 121 141 IPR001623 -
Alju01g2407 570 ProSiteProfiles dnaJ domain profile. 85 149 IPR001623 -
Alju01g2407 570 ProSitePatterns Nt-dnaJ domain signature. 126 145 IPR018253 -
Alju01g2407 570 SUPERFAMILY Chaperone J-domain 81 192 IPR036869 -
Alju01g2407 570 CDD DnaJ_zf 233 297 IPR001305 GO:0031072|GO:0051082
Alju01g2407 570 CDD DnaJ_C 205 427 - -
Alju01g2407 570 Gene3D - 350 441 - -
Alju01g2407 570 FunFam Chaperone protein dnaJ A6 chloroplastic 82 188 - -
Alju01g2407 570 Hamap Chaperone protein DnaJ [dnaJ]. 82 490 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Alju01g2407 570 Gene3D - 233 297 - -
Alju01g2407 570 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 220 300 IPR036410 -
Alju01g2407 570 Gene3D - 203 339 - -
Alju01g2407 570 Pfam DnaJ C terminal domain 206 424 IPR002939 -
Alju01g2407 570 ProSiteProfiles Zinc finger CR-type profile. 220 302 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g2407 Alju-ChrAlju01 22075449 22082433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g2407 86 146 C2H2 Transcription Factor Family AT1G74250 43.284 2.98e-07 51.6